| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1234 |
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| Symbol | |
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| ID | 4017283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1436850 |
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| End bp | 1439339 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955230 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_562243 |
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| Protein GI | 91792592 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTA ATAAAGCAAA GCTAACCGAA ACCGATATCA TCACAAAATT CATCATGCCG
GCGATTAAAA ATGCGGGCTG GGATGATATG ACGCAAATTC GCCAAGAGGT GAAACTGCGT
GACGGTAAAG TGATTGTTCG CGGCCAATTA GGCGTGCGTA AAACGGTTAA GTCTGCTGAT
ATCGTGCTTT ATCATAAACC CAGTATGCCG CTGGCTGTTA TTGAGGCTAA AGCCAATAAA
CATGAAGTGG GCAAAGGCAT GCAGCAGGGG CTAGATTATG CCCGTTTGCT CGATGTACCT
TTCATCTTTG CCTCTAATGG CGATGGTTTT ATCTTTCACG ATAAAACCCA CGGCGTCACA
AACAGTCTCG GCATCGCTGA GACACATCAT CTCGAAACAG AAATCCGCTT AGAAGACTTT
CCAACGCCGC AACAGCTTTG GACTAAATAC TGTATCTGGA AAGGCTACAC CCAAGCGCAG
CTGCCAATAA TTAACCAAGA ATATCATGAT GATGGCACCG GCAAGCACCC GCGGTATTAC
CAGCTGCAAG CTATCAATAA AACCGTAGAA GCCATTTCAT CGGGTAAAGA CCGTGTATTA
CTCGTGATGG CGACCGGCAC AGGTAAAACC TACACCGCAT TTCAAATCAT CTGGCGATTA
TGGAAGTCCC GCGCCAAGAA GCGCATCTTG TTTTTAGCCG ACCGCAATAT TTTGGTTGAT
CAAACCCGCA TTAATGACTT TCAGCCCTTT GGCACTTCCA TGACTAAAGT CACTGGACGC
ACGGTCGATC CTGCATTTGA AATCCATCTA GCCTTATACC AAGCATTAAC CGGCCCAGAA
GAAAGCCAAA AAGCCTTTAA GCAAGTCGAC CCAGACTTCT TTGACTTAAT CATAATCGAC
GAGTGCCACC GCGGTAGTGC AGCAGATGAC AGTGCATGGC GTGAAATTTT AGAATATTTC
AGTAGCGCCG CCCAAGTTGG CCTTACTGCC ACCCCTAAAG AAACTGATGA AGTATCAAAC
TCAGACTACT TTGGCGACCC TGCCTACAGT TATTCCCTCA AGGAAGGCAT TGAAGACGGT
TTTTTAGCGC CATACAAAGT GGTGCGGGTA GATATCGATG TCGATTTACA AGGTTGGCGC
CCCACAAAAG GCCAAATCGA TAATAACGGT GAAGTGATAG AAGACAGAAT TTATAATCAA
AAAGACTTCG ACCGCACCAT GGTGATTGAT GAGCGCACCC AGCTGGTAGC CGAAACCATC
ACCAACTACC TAAAACGCAC CGATCCTATG GCCAAAACTA TCGTGTTTTG CAACGACATT
GACCACGCCG ATCGCATGCG CCGCGCTATT GCCAACCTTA ACCCTGAGCA AATGGCCAAG
AATGAAAAAT ACGTGATGAA AATCACCGGC GATGATGAAA TAGGCAAAGG GCAGCTGGAC
AACTTTATTA ATCCTAAAAA AGCCTACCCT GTTATTGCCA CTACCTCTGA GCTTATGACC
ACAGGCGTCG ATGCTAAAAC CTGTAAGTTA GTGGTGCTGG ATCAAAACAT TCAGTCCATG
ACCAAGTTTA AACAGATCAT TGGCCGTGGC ACCCGCATTG ACGACAGATA CGGTAAGCTG
TGGTTTACTA TTTTAGACTT CAAAAAAGCC ACTGAACTGT TTGCCGACGA ACGCTTTGAT
GGTACCCCAG AAAAAGTGAT TAAAGTGACA CCCGCAGATA TCGAAGATCA AGGCATTGAT
ATTGATGCGG CTAATGATGA CCTCGATAAC GGTGCGGCAG AAAATCAAGG TGATCACCAA
AATGATGAAC CGGATACTAA TCAAAATGAC ACCATAAACG ACCCTAAAGG TGATGCTAGC
CTTGATGAAA AATGGGACGA AGGTGAATGG ACTGACGATG AACCCCGTAA AATAAACAAA
TACCGCGTGT CAGGGGTCAC CGTCAGTAAA GTGGCCGAGC GGGTACAGTA TTACGACAGC
GACGGTAAAT TAGTTACCGA ATCTTTTAAA GATTACACCC GTAAAACCAT GGCTAAACAG
TTCAGCTCGT TAGATGAATT CGTCAAGCGT TGGAATGAGT CAGACCGCAA ACAAGCCGTG
ATTGATGAAT TGGCGCTGGA AGGCATTATT TGGTCGGCGT TAGAGGAAGA AGTGGGTAAA
GACATGGACC CCTTCGATAT GATTTGCCAC GTAGTGTACG ATCAACCACC ACTCACCCGC
GCCGAACGAG TAAATAACGT GCAAAAGCGC AATTACTTCA CTAAATATTC AGCCACAGCA
CAAGCGGTAC TGCAGAATTT ACTGGTAAAA TATGCTGATG TTGGCGTGCA AGAAATTGAA
AACATGCAAG TGCTCAAAGT TGCCCCATTT ACCGAGTACG GTAATTTGAG TGAAATCGTT
AAAAAAGGCT TTGGCGGCAA ACAAGAATAC GAGCAAGCCA TCAGTGAATT AGAAGCGCAG
ATTTATCAAA TTCACCAGCA AACGGCCTAG
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| Protein sequence | MSVNKAKLTE TDIITKFIMP AIKNAGWDDM TQIRQEVKLR DGKVIVRGQL GVRKTVKSAD
IVLYHKPSMP LAVIEAKANK HEVGKGMQQG LDYARLLDVP FIFASNGDGF IFHDKTHGVT
NSLGIAETHH LETEIRLEDF PTPQQLWTKY CIWKGYTQAQ LPIINQEYHD DGTGKHPRYY
QLQAINKTVE AISSGKDRVL LVMATGTGKT YTAFQIIWRL WKSRAKKRIL FLADRNILVD
QTRINDFQPF GTSMTKVTGR TVDPAFEIHL ALYQALTGPE ESQKAFKQVD PDFFDLIIID
ECHRGSAADD SAWREILEYF SSAAQVGLTA TPKETDEVSN SDYFGDPAYS YSLKEGIEDG
FLAPYKVVRV DIDVDLQGWR PTKGQIDNNG EVIEDRIYNQ KDFDRTMVID ERTQLVAETI
TNYLKRTDPM AKTIVFCNDI DHADRMRRAI ANLNPEQMAK NEKYVMKITG DDEIGKGQLD
NFINPKKAYP VIATTSELMT TGVDAKTCKL VVLDQNIQSM TKFKQIIGRG TRIDDRYGKL
WFTILDFKKA TELFADERFD GTPEKVIKVT PADIEDQGID IDAANDDLDN GAAENQGDHQ
NDEPDTNQND TINDPKGDAS LDEKWDEGEW TDDEPRKINK YRVSGVTVSK VAERVQYYDS
DGKLVTESFK DYTRKTMAKQ FSSLDEFVKR WNESDRKQAV IDELALEGII WSALEEEVGK
DMDPFDMICH VVYDQPPLTR AERVNNVQKR NYFTKYSATA QAVLQNLLVK YADVGVQEIE
NMQVLKVAPF TEYGNLSEIV KKGFGGKQEY EQAISELEAQ IYQIHQQTA
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