| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1230 |
|---|
| Symbol | |
|---|
| ID | 4017279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1432953 |
|---|
| End bp | 1433996 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637955226 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_562239 |
|---|
| Protein GI | 91792588 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCGA ATTTATTTCA GGCTTATAAA CTTAATAGCA GCTTAACCCT ATCGAACAAA
ATCTTAATGG CACCACTGAC TCGCTGCATG GCAGACAATG ACCTAGTGCC CACTCAAGCC
ATGGCCGATT ATTATGCCCG CCGAGCAGAC GCTGGGCTGA TTATTAGCGA AGCCACTATC
ATTAGGCCAG ATGGCCAAGG CTACCCTAAT ACCCCAGGTT TGTTTACCCC TGCGCAAATT
CTAGGTTGGC GCACTGTCAC AGATGCAGTG CACAGTAAAG GCGGCAAAAT TTTTGCGCAG
CTTTGGCACA CAGGCCGAGT GGCACATCCA CACTTTTTCG GCGGCGGAAA AGTATTATCT
GCATCTGCAC AAGCGGTCGA AGGAAGCGTA CCTAGAATGC GAGAGTTAAC CTATCAAACT
CCAACTCCAG CGAGCCTCGC TGATATTAAG CAACTGGTTG CCGATTACGC CCAAGCTGCG
GCTAATGCCA TCGATGCAGG TTTCGATGGG GTAGAAATAC ACGGTGCTAA CGGCTATTTA
ATCGATCAGT TCTTACATCA TGAGAGTAAC CGACGCGAGG ATGAATATGG CCAAACCCCG
GCTAATATGT CGCGCTTTGC CCTTGAAGTG GTGGATGCCA TCACAGCCCG TATTGGCGCC
GACAGAACGG CACTGCGCCT TTCTCCTGGT GCATATTTTA ATATGGGCGC AGATAAGCGA
GACCGTGAGG TGTTCGATTA TTTATTGCCT GAACTTGAAA AACGCGAATT AGCCTTCTTA
CACATAGGTA TTTTTGACGA TGCCATGGAG TTTGATTACT TGGGCGGCAG CGCATCGAGT
TATGTTCGCA GTATTTACCA AGGCACACTC GTGGGCGTTG GCAGTTACAC GGCGCAAACC
GGTGATGCAG CCATTGCGGC TGACAAGTTT GATTTACTGG CCATAGGCAG ACCCTTTATC
GCTAACCCAG ATTACGTGGC TCGCGTGCGT CAAGGTCAAG AGCTGGTGGC CTATTCAGAT
GCCATGTTAG CCGAATTAGT TTAA
|
|---|
| Protein sequence | MSANLFQAYK LNSSLTLSNK ILMAPLTRCM ADNDLVPTQA MADYYARRAD AGLIISEATI
IRPDGQGYPN TPGLFTPAQI LGWRTVTDAV HSKGGKIFAQ LWHTGRVAHP HFFGGGKVLS
ASAQAVEGSV PRMRELTYQT PTPASLADIK QLVADYAQAA ANAIDAGFDG VEIHGANGYL
IDQFLHHESN RREDEYGQTP ANMSRFALEV VDAITARIGA DRTALRLSPG AYFNMGADKR
DREVFDYLLP ELEKRELAFL HIGIFDDAME FDYLGGSASS YVRSIYQGTL VGVGSYTAQT
GDAAIAADKF DLLAIGRPFI ANPDYVARVR QGQELVAYSD AMLAELV
|
|---|
| |