| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1225 |
|---|
| Symbol | |
|---|
| ID | 4017274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 1429177 |
|---|
| End bp | 1429614 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637955221 |
|---|
| Product | OsmC-like protein |
|---|
| Protein accession | YP_562234 |
|---|
| Protein GI | 91792583 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTC AACTCACGGT AAGCTGGGAC AACTCAGTGC AAGTGGCTGA CGATTTTAGC
CGCGATCATA AAATCACCTA TGGCAGTGGC CAAGTGATCC ACGCTTCTTC TGCGCCTGAA
TACAAGGGCA GCGAAGATAA AATCAACCCT GAAGAGAACT TGCTCGCTGC ACTATCGTCT
TGCCATATGC TGACGTTTCT AGCCATAGCC CATTTAAAAC GTTTGCCGGT AGCCAGTTAT
GTGGATGAGG CCAGTGCCGA TTTAGGTAAA ACCGAATCTG GAAAACTTGC CGTGACCAAG
ATGATCTTAA ACCCCAAAGT CGTGTTTGCA GAAGGAGTCA ATGTCGATCA TGAGACCTTA
GCCAAGATGC ACGATAAAGC CCACGTTAAC TGTTTTATCG CCAACAGCTT ACGCTCAGAG
GTCGAAATTA ATTTTTAG
|
|---|
| Protein sequence | MGFQLTVSWD NSVQVADDFS RDHKITYGSG QVIHASSAPE YKGSEDKINP EENLLAALSS
CHMLTFLAIA HLKRLPVASY VDEASADLGK TESGKLAVTK MILNPKVVFA EGVNVDHETL
AKMHDKAHVN CFIANSLRSE VEINF
|
|---|
| |