Gene Sden_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1224 
Symbol 
ID4017273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1428343 
End bp1428834 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content52% 
IMG OID637955220 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_562233 
Protein GI91792582 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCC AAGTTGCAAT CGTTATGGGT TCTAAGAGTG ATTGGCCGAC CATGGAAGCC 
GCTGCCGATA TTTTAGATTT ACTGCAAGTG CCCTACCATG TGGAAGTTGT CTCGGCGCAC 
CGCACTCCGG ATAAGTTAAT GGAATTTGCC AGTGCCGCAG TAAAGTCCGG CTTTAAAATT 
ATCATAGGCG GCGCTGGCGG CGCGGCTCAT CTACCAGGCA TGATTGCCGC TAAGACTCGC 
CTTCCTGTAC TCGGGGTACC CGTGCAAAGT AAAGCCCTGT CAGGCATGGA CAGCTTATTA 
TCCATAGTAC AAATGCCTAA AGGCATAGCC GTTGGCACAC TGGCTATTGG CACAGCTGGG 
GCGTTTAACG CCGGATTACT CGCCGCACAA ATGTTGGCAA ACCATGATGC ACAGCTTGCG 
GCACGTCTTG ATGCCTTTAG AGAGCAACAA ACCCGCACCG TATTAGAGAA TCCCGATCCG 
AGAGTCGATT AA
 
Protein sequence
MSAQVAIVMG SKSDWPTMEA AADILDLLQV PYHVEVVSAH RTPDKLMEFA SAAVKSGFKI 
IIGGAGGAAH LPGMIAAKTR LPVLGVPVQS KALSGMDSLL SIVQMPKGIA VGTLAIGTAG 
AFNAGLLAAQ MLANHDAQLA ARLDAFREQQ TRTVLENPDP RVD