| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1223 |
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| Symbol | |
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| ID | 4017489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1427258 |
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| End bp | 1428289 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955219 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_562232 |
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| Protein GI | 91792581 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCACG CCGGTGAGCG CTTAGCCTTG CATGTTAAAC CGGTTGATAT TATGTCGCCT
CAGGCTGAAC CCCTTGTCTT AGGTCAGGAT GACATCATCA CCGTCGAGCG CGAGCAATGG
CCAGAGTCCA GCATTAGTTT GCAATTAAGT CAGCATTGCC ATTTTATTAA TGGCCCTGTA
TTTGCTCGAC TTGCCGACAG ATACAGCCAA AAATCCTTAC TTGATGAACT TGCCATCGCC
ACCGCGCCTT GGGAGTTAGT CCAGCAAGAG ACTCAATCGG CAGCGTTACA TCAACGCTAT
GGCGGGCGCG TGTTACTCAA GCGCCGTACT GGCGGCTATG ATGGTAAAGG TCAGCACTGG
TTGAAGCAGC CTGAGAAAAC GGATATTCCA GCCGATTGGC GCGATGAGGC CATTGCAGAG
CAAGCGATTA ATTTCGATGA AGAAGTCTCG CTTGTGGGCG CGAGAACCCA AGACGGGCGC
TGCGTGTTTT ACCCTTTGAC TCTCAATCTG CATCAAGACG GTATATTAAT GGCTTCTGTC
GCCCCTTTAG CGCGGCTTGA GTCATTGCAA ACCAAGGCGC AAGCCATGTT AAGCTGCATA
ATGAATGAGC TTAACTATGT CGGCGTGATG GCCATGGAAT GCTTTAAAAT CGGCGATGAT
TTACTGGTCA ATGAGCTTGC CCCGCGAGTG CACAACTCGG GCCACTGGAC CCAGAGTGCT
TGTCATATCA GTCAGTTCGA AATGCATTTA CGGGCTATTG CTGGCTTGCC TATGCCTGAA
CCTAAGGTGA ATTACCCGGC GGTAATGATA AATCTTATCG GGGTAGAAAA AGACAATAAC
TGGCTAAGCC TGAGCAATGG TGAGCTTTTT TGGTATGACA AAGCAGTACG GCCTGGCCGC
AAGGTCGGAC ACCTTAATTT ATCTGCCCAA GATGAGGTTG AGCTAAGCCA GAGCCTTAAA
TTGCTGTCAT TATGGCTACC AGAGCAATAC CAAGCGCCAC TTGAGTGGGC CGCCAAGGCC
AGTCGCAGTT AA
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| Protein sequence | MAHAGERLAL HVKPVDIMSP QAEPLVLGQD DIITVEREQW PESSISLQLS QHCHFINGPV
FARLADRYSQ KSLLDELAIA TAPWELVQQE TQSAALHQRY GGRVLLKRRT GGYDGKGQHW
LKQPEKTDIP ADWRDEAIAE QAINFDEEVS LVGARTQDGR CVFYPLTLNL HQDGILMASV
APLARLESLQ TKAQAMLSCI MNELNYVGVM AMECFKIGDD LLVNELAPRV HNSGHWTQSA
CHISQFEMHL RAIAGLPMPE PKVNYPAVMI NLIGVEKDNN WLSLSNGELF WYDKAVRPGR
KVGHLNLSAQ DEVELSQSLK LLSLWLPEQY QAPLEWAAKA SRS
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