Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1216 |
Symbol | |
ID | 4017482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1417796 |
End bp | 1419121 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955212 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_562225 |
Protein GI | 91792574 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCTTT CTATTTTCAA CACGCTCTTT TTATTCTTCA CCGTATTTAT CTACTTATTT GGAACCACAA TGATAGTTAA CGCCCTTGCA CGTATGCCAT TTTGGCAAAA AGTCCTCGCA GGTTTCATGC TAGGTGCCCT AGCCGGTGTT TTTTTAGGTG AAACTGCCGC CATCTTTAAA CCCCTTGGGG ATTTGTTTAT CGCAGCCATC AAGATGCTGG TCGCTCCTTT GGTGCTGTGC GCCATCGTCG TCAGCATTAC CTCGCTAGGC TCACAAACTA ACCTTAAGCG CTTAAGTTTT AAAACCTTAG GCATGTTTAT GCTCACAGGC ACAGTCGCTT CATTTATTGG TCTGGCCGTA GGTAGCTCAA TCGATATGGG CGGTTCATTG GAGCTTGCAA GTGCTGAAGT GCGTGAGCGA AATATTCCAG GATTTTCCCA AGTGCTGCTG GATATGATCC CTGTGAATCC TTTTGCCTCA TTAGCCGAAG GTAAGGTGCT GCAAATTATC GTATTTGCCG CTTTAATCGG CATCCCCATT AATGCGGTCG GTGAAAAAGC CGAGCCATTG AAAAAAATGT TTGAAGCGGG CGCCGAAGTG ATGTTCCAGC TGACTCGTAT GGTGCTAAAA CTGACTCCCA TTGGTGTATT TGGCTTAATG GCTTGGGTGG TGGGTGAATA TGGCTTAAGT ACCCTATTAC CTTTAGGTAA GTTTATTATT GCTATTTATG TTGCCGCGCT AATCCACATT ATTTTTGTTT ATGGCGGCCT AGTTAAATTT GCCGCAGGCC TAAGTCCTGT GCAGTTTTTC CGCAAAGCGC TACCGGCGCA GATTGTGGCA TTTAGCACCG CATCAAGCTT TGGCACCCTG CCTGCCAGTA CCCGTTGTAC TGAGTCTATG GGTGTATCTG AGCGTTACAG TGCCTTTGTG TTACCCCTTG GCGCCACCAT GAACATGGAT GGCTGCGGCG GGATCTACCC TGCTATTGCC GCCATCTTTA TTGCGCAAAT CTATGGTATT CCATTAGATA TGATGGATTA CCTGCTCATT GCAGTCACTG CAACTGTCGC CTCTGTAGGT ACAGCAGGCG TGCCTGGTAG CGCCATGGTG ATGCTAACGG TAACTTTAGG TGTGGTAGGG CTCCCCCTTG AAGGTATCGC CTTTATTGCC GCTATAGACA GGGTAATTGA TATGATCCGC ACAGCCACCA ATGTCACAGG TGACATGATG ACTGCTGTTG TGGTGGGTAA AAGCGAAGGC CAATTAGATG AAGCACAGTT TTATGCTAAT GAGTCAGACG AAGATGGCAC TCAAGTAAGT AAATAA
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Protein sequence | MLLSIFNTLF LFFTVFIYLF GTTMIVNALA RMPFWQKVLA GFMLGALAGV FLGETAAIFK PLGDLFIAAI KMLVAPLVLC AIVVSITSLG SQTNLKRLSF KTLGMFMLTG TVASFIGLAV GSSIDMGGSL ELASAEVRER NIPGFSQVLL DMIPVNPFAS LAEGKVLQII VFAALIGIPI NAVGEKAEPL KKMFEAGAEV MFQLTRMVLK LTPIGVFGLM AWVVGEYGLS TLLPLGKFII AIYVAALIHI IFVYGGLVKF AAGLSPVQFF RKALPAQIVA FSTASSFGTL PASTRCTESM GVSERYSAFV LPLGATMNMD GCGGIYPAIA AIFIAQIYGI PLDMMDYLLI AVTATVASVG TAGVPGSAMV MLTVTLGVVG LPLEGIAFIA AIDRVIDMIR TATNVTGDMM TAVVVGKSEG QLDEAQFYAN ESDEDGTQVS K
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