| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1203 |
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| Symbol | |
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| ID | 4017726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1398784 |
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| End bp | 1399719 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955193 |
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| Product | peptidase M23B |
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| Protein accession | YP_562212 |
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| Protein GI | 91792561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000304892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCT TTTGGCCAAC ATGCTTGTGC ATTATTTTGT TTGCCTCAGG CTGCAGCTTT
CAGGCTCAGC GCCCCGCACC TGTCGAAAGT ATATCCAGTG TCCATGGCCA GAAATACCAT
AAAGGGTCTA TCCAATCTGA GCATTATCGA GTCAAAAAAG GCGATACCTT GTACTCCATC
TCTTGGGGGG CGGGAAAAAA CTTTATCCAA GTGGCAAAGC TTAATCGCTT AACCCAGCCA
TACACTATTT ATCCTGGCCA AATCATCAAA CTTAGCGCTG AAAATAGCCA ATATTCAGCC
GGTGTTAGTC GGTCTCAACC CCAGCAGTCA CAAGGGGCAG GGGTTGTGAG TGGAAGTATT
AGCCAACCTT ACCAAGTGGC TAATACACCA AGTAAAACTT TAGTGGGACA AACCCCAAGA
CCCATTCCAG CACAGGAAAA CGTTTCCGCA AATAGTACAA AAAAAGTGCT TGATCAAACT
TCAAACTCTG CGTACTCTGT AACAACTGCT AAACAAACTA TTAACTTGAA TGCCAAGGAG
CAGACCAACC TTTTACCCGC ACAAGTGAGT CATTGGTATT GGCCAGTTTC AGGTAAGTTA
ATAGGCACAT TTTCAGAGAC ACAGCAGGGC AATCAAGGTA TTAAGATTGC TGGTCGACGC
GGAGAGTTAA TCAAAGCGGC GGCCGATGGT AAAGTCGTTT ACGCAGGCGA TGCATTACGT
GGTTACGGCA ACTTAGTCAT TATCAAACAT AACGATGATT TTCTTAGTGC TTATGCTCAC
GCAGAAACGA TTTTAGTCAA AGAAAAACAG CTAGTCGCAG CGGGTCAAGC CGTTGCAAAA
ATGGGTAACA GTGGCGCTAA CCAAGTGATG CTCCACTTTG AGATCCGTTA CCACGGAAAA
TCAGTTAACC CATTAAAATA TCTACCTAAA CAATGA
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| Protein sequence | MTRFWPTCLC IILFASGCSF QAQRPAPVES ISSVHGQKYH KGSIQSEHYR VKKGDTLYSI
SWGAGKNFIQ VAKLNRLTQP YTIYPGQIIK LSAENSQYSA GVSRSQPQQS QGAGVVSGSI
SQPYQVANTP SKTLVGQTPR PIPAQENVSA NSTKKVLDQT SNSAYSVTTA KQTINLNAKE
QTNLLPAQVS HWYWPVSGKL IGTFSETQQG NQGIKIAGRR GELIKAAADG KVVYAGDALR
GYGNLVIIKH NDDFLSAYAH AETILVKEKQ LVAAGQAVAK MGNSGANQVM LHFEIRYHGK
SVNPLKYLPK Q
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