Gene Sden_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1196 
Symboleno 
ID4017681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1393022 
End bp1394317 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content48% 
IMG OID637955186 
Productphosphopyruvate hydratase 
Protein accessionYP_562205 
Protein GI91792554 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.061056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACA TTATTAACGT CATTGGTCGC GAAATCATGG ATTCTCGTGG TAACCCAACG 
GTTGAAGCAG AAGTGCATTT AGCCGGTGGT TTTATCGGTA TGGCTGCTGC GCCATCGGGC
GCCTCTACCG GTAGCCGTGA AGCCTTAGAA TTGCGAGATG GTGATAAGAG CCGTTACTTA
GGTAAAGGTG TGCTTAACGC CGTTGCCAAC ATCAATGGCG TCATCAAAGC GGCCTTAATG
GGTAAAGATG CTGCGGCTCA AGCTGAGCTT GATCAAATCA TGATCGATTT GGATGGCACG
GAAAATAAAG ACAAGTTAGG CGCCAACGCG ATTCTTGCTG TGTCGCTTGC AGCGGCAAAA
GCGGCGGCTA TGTCAAAAGG CATTCCTTTG TATGCTCATA TCGCAGAATT GAATGGCACT
CCTGGGGTTT ACTCTATGCC TGTGCCTATG ATGAACATTA TCAATGGTGG TGAGCACGCC
GATAACAACG TCGATATTCA AGAGTTTATG GTGCAGCCTG TTGGCGCTAA AAATTTCCGT
GAAGCCTTAC GTATGGGCGC GGAAATTTTC CACAGTCTTA AGAAAGTACT GCAAAGCAAA
GGCCTAAGCA CGGCAGTGGG TGATGAAGGT GGTTTTGCAC CTAACCTTGC TTCAAACGCT
GAAGCCCTAG CGGTAATTAA AGTGGCGGTG GAAGAAGCTG GCTACAAGCT TGGCACAGAC
GTGACCTTAG CCCTTGATTG CGCGGCCACT GAATTCTACA AAGATGGCAA GTATGACTTA
GCCGGCGAAG GTAAAGTCTT TGACTCAAAT GGTTTTTCTG ACTTCTTAAA GTCGTTAGCT
GACCAATACC CCATCGTGTC TATCGAAGAT GGCCTTGATG AATCAGATTG GGAAGGCTGG
GCGTACCAGA CTAAAATCAT GGGCGACAAG ATCCAGTTAG TGGGCGACGA TTTATTCGTG
ACCAACACCA AAATCTTAAC CCGTGGTATT GAGAACAATA TCGCTAACTC TATCTTAATC
AAATTTAACC AGATTGGTTC CTTGACTGAG ACACTGGCAG CCATTCGCAT GGCGAAAGAA
GCGGGCTATA CGGCTGTGAT TTCACACCGT AGTGGTGAAA CTGAAGACTC GACCATTGCC
GATCTTGCCG TAGGCACAGC AGCGGGCCAA ATCAAGACAG GTTCTCTGTG TCGCTCCGAT
CGCGTGGCTA AGTACAACCA ATTGCTGCGC ATCGAAGAGC AGTTAGGTGA GAAAGCCCCA
TACCGTGGTT TGAAAGAGAT CAAAGGCCAA GCATAA
 
Protein sequence
MANIINVIGR EIMDSRGNPT VEAEVHLAGG FIGMAAAPSG ASTGSREALE LRDGDKSRYL 
GKGVLNAVAN INGVIKAALM GKDAAAQAEL DQIMIDLDGT ENKDKLGANA ILAVSLAAAK
AAAMSKGIPL YAHIAELNGT PGVYSMPVPM MNIINGGEHA DNNVDIQEFM VQPVGAKNFR
EALRMGAEIF HSLKKVLQSK GLSTAVGDEG GFAPNLASNA EALAVIKVAV EEAGYKLGTD
VTLALDCAAT EFYKDGKYDL AGEGKVFDSN GFSDFLKSLA DQYPIVSIED GLDESDWEGW
AYQTKIMGDK IQLVGDDLFV TNTKILTRGI ENNIANSILI KFNQIGSLTE TLAAIRMAKE
AGYTAVISHR SGETEDSTIA DLAVGTAAGQ IKTGSLCRSD RVAKYNQLLR IEEQLGEKAP
YRGLKEIKGQ A