| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1193 |
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| Symbol | |
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| ID | 4017678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1387859 |
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| End bp | 1390066 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955183 |
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| Product | RelA/SpoT family protein |
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| Protein accession | YP_562202 |
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| Protein GI | 91792551 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000349735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCTG TTCGTGAAGC ACACTTTAAT TCGCCGGATT TTCAATTAGA TGAGTGGGTT
GCCCGCTATA TTGAACATCC CGAGGATGCG CAAATTGTAC TTAAGCTCAT CACTGAGTTA
GAGACGCTTG GCTTTGAATC AAACGCCGAG CGACAAGAAG TGATGGAGCG TGCTCGCGAA
ATGATAGAGA TTTTAGCGCC GCTTAACATG GACATAGAAA CCCTGCAGGC CTCGCTGCTG
TTCGTGCTGC TGGATGCGGG CAAATTGACT GAACTTAAAG TCGAAGAAGA TTATGGCCCA
AGACTTGGGA GTTTAGTCTC AAGCGTTGTG ACCATGAATG CCATCGGCGC CTTGAAAGCC
AGCAAAGATA ATCGCTCCGG CGAGCCGCAA ATCGATAACA TCCGCAAGAT GCTGCTGGCT
ATGGTTGAAG ATGTACGCGC TGTGGTGATT AAACTTGCCG AGCGCGTGTG TTTGCTTAGG
GCTGTTAAAA ACGCCGATGA AGAAACACGA GTGCTTCTGG CCCGAGAAAT TGCCGACATT
TATGCGCCTC TGGCTAACCG CTTAGGCATA GGTCAGCTCA AATGGGAGCT TGAAGACCTC
TCCTTTCGCT ATCTGCACCC AAACACTTAC AAAGACATCG CCAAGCAGCT GGATGGTAAA
CGCCTCGATC GAGAAACCTT CATCGATAAG TTTGTGACTC AGTTGCAGCA AAGATTAGAT
GCCGATGACA TTCGCGCCAA GGTCTATGGC AGACCGAAAC ACATCTACAG CATTTGGCGC
AAGATGAAGG GCAAAGATCT AAAATTTGAT GAACTGTTTG ATGTGCGCGC CGTGCGCATC
GTCACCGATC GTCTGCAAGA TTGTTATGGT GCGTTAGGTG TCGTGCATAC CCTTTGGCAT
CATATTCCCC GCGAGTTTGA TGACTATGTG GCTAACCCTA AACCTAATGG CTATCAATCT
ATCCATACCG TGGTGGTAGG CCCAGAAGGC AAGACGGTAG AAATCCAAAT TCGCACCGAA
GCCATGCATC AAGATGCAGA GCTTGGGGTG GCCGCTCACT GGAAATACAA AGAAGGCCCG
CAAGCGGGTA AGCAAAGCGG CTATGAAGAA AAAATTAACT GGCTGCGTAA GATTTTGCAG
TGGCAAGAAG ATGTGGCCGA AAGTGGCAAC TTGGTGGATG AAGTGCGCAG CCAAGTGTTT
GAAGACAGAG TCTATGTCTT TACCCCAACA GGTGAGGTGG TGGACTTACC CTTAGGCTCA
ACCGTGCTGG ATTTCGCCTA TTATGTTCAC TCCCAAGTGG GGCATAAGTG TATTGGCGCT
AAGGTCGATG GCCGTATCGT GCCCTTTACG TACCAAGTGC AAACCGGTGA GCGCATCGAA
ATTATCACCT CTAAGCACCC CAATCCTAAG CGCGACTGGC TAAACCCAAA TCTTGGTTAT
ATTAAGTCGT CTCGTTCACG CTCCAAAATT CAGCATTGGT TTAAACAGCA AGATAGGGAT
AAAAACATTC CAGCGGGCAA GGAAATGTTG GAGACAGAGT TATCCCGCAT TGCCCTTAAG
CTTAAAGATG CCCAAGTGGC GGTGGAGCGC TTTAATTTAA ACAGCATGGA TGACATGTTG
GCGGCGCTTG GCGGCGGCGA TCTAAAGTTA AACCAAGTGG TTAACTTTAT TGAAAGTAAA
GTGCGTAAGA CGCCGGATAG TGAACAAGAG TTAGTCGAAG AAATCATCAA AAAAGCCCAA
CCTCGCAAGG GTAAGAGCGG TAAAGGCCAA GTGGAAGTTA ATGGGGTAGG TAATTTACTG
AGCCATATTG CCCGCTGTTG TCAGCCTGTG CCTGGGGATG AAATCTTTGG CTATATCACC
ATGGGCCGCG GCATTTCCGT GCATCGCAGC GATTGCGAGC AAGTTAAAGA GCTAATGCGC
GTTCACCCAG AGCGTGCCGT CGATGTGATT TGGGGGGAAA ACTACTCAGG GGGCTACCGT
CTTAGGGTCC GCGTGGTAGC CCATGATAGA AGTGGTTTAC TGCGAGACAT CACGACAGTG
TTAGCGGCGG AGAAATCCAA CGTAATGGCC ATGAGTTCAT CTTCAGATAT CAAGACCCAA
ACGGCCACGG TAGAGCTGGA ATTGGAGCTC TATAACCTCG ATGGACTAGC CCGGGTAATG
GCAAAGCTTA CTCAAGTGGA AGGGGTGATT GAGTCGCGGC GCTTATAA
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| Protein sequence | MVSVREAHFN SPDFQLDEWV ARYIEHPEDA QIVLKLITEL ETLGFESNAE RQEVMERARE
MIEILAPLNM DIETLQASLL FVLLDAGKLT ELKVEEDYGP RLGSLVSSVV TMNAIGALKA
SKDNRSGEPQ IDNIRKMLLA MVEDVRAVVI KLAERVCLLR AVKNADEETR VLLAREIADI
YAPLANRLGI GQLKWELEDL SFRYLHPNTY KDIAKQLDGK RLDRETFIDK FVTQLQQRLD
ADDIRAKVYG RPKHIYSIWR KMKGKDLKFD ELFDVRAVRI VTDRLQDCYG ALGVVHTLWH
HIPREFDDYV ANPKPNGYQS IHTVVVGPEG KTVEIQIRTE AMHQDAELGV AAHWKYKEGP
QAGKQSGYEE KINWLRKILQ WQEDVAESGN LVDEVRSQVF EDRVYVFTPT GEVVDLPLGS
TVLDFAYYVH SQVGHKCIGA KVDGRIVPFT YQVQTGERIE IITSKHPNPK RDWLNPNLGY
IKSSRSRSKI QHWFKQQDRD KNIPAGKEML ETELSRIALK LKDAQVAVER FNLNSMDDML
AALGGGDLKL NQVVNFIESK VRKTPDSEQE LVEEIIKKAQ PRKGKSGKGQ VEVNGVGNLL
SHIARCCQPV PGDEIFGYIT MGRGISVHRS DCEQVKELMR VHPERAVDVI WGENYSGGYR
LRVRVVAHDR SGLLRDITTV LAAEKSNVMA MSSSSDIKTQ TATVELELEL YNLDGLARVM
AKLTQVEGVI ESRRL
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