| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1189 |
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| Symbol | |
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| ID | 4017674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1381604 |
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| End bp | 1382602 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955179 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_562198 |
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| Protein GI | 91792547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000379435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCAA CTCTCACCCC CATAGCCGCA GTTTTTGGCA TTATGCTACT TGGGGCCATA
GTTCAAAAAA GTAAACTGCT CCCCAGCGAC AGCGACAACA TACTCAATCA ATATGTGTAC
TATGTGGCGT TTCCCGCCAT CATGTTTATC GCCTTAGCCC AGACCCCGTT CGCCTCCATT
ACTCAGTGGG GTTTTATCTG CGCCTTAAGC CTTAGCATGG TGTTCACCTA TGTGATTGCC
CTAGGGCTAT CTTATTGGGC CAACCCTGAA AAATCGGCAC TTGCCGCGAT CCGGGCCCTG
AATGCCACCT TTGGCAATAC CGCCTTTATT GGCATTCCCT TACTGGGCAT GTTATTTCCC
GATGACAAAA GTGCCTTAGT GGCTGCCGCT ATCGCCAGTT TATTGTCTGT TGTCATGTTT
GCCTTTGCCT TAGTGAGCAT AGAAATCGCC ACCAGTAAGG CATTAACGGG CAAAAAAACT
GACCAACATC AGATCCAAGC CTCCCATCCT TTAATGATCA TGCTGCACGC GCTAGGCTCA
AACCCCATAG TGATTGCCAG TGCCTTGGGG GTTGGAGTCT CTGCAGCCGC CCTAAATCTC
CCCGAGAGCC TCAGCCAGAT GTTGCACCAA GTGGGTAACA CTTCAAGCCC TTGCGCCCTC
TTTGCCATAG GCATGGTGCT TACCAAAGCC ATGCACAGAG ACTCAGGTAG CCTTCGCTGG
GATAAGGCAT TCATCATAGA GCTTAATCTG ATTAATTTTC TTAAGCTCAT CCTTCAACCT
TTAACGGCCT ATGCATTACT CAGCCTATTT AAGGTTGAGG GTCAATGGCT CACCATGGGA
GTGATTTTAG CGTCATTGCC TACAGCGGCG AGCGTGTATT TATTGGCTCA GCGCTATCAA
GTTCACACAT CCCAGAGCGC CTTTGCCATC TTGATAAGCA CAGTGCTAAC CTTCATCAGT
TTGCCTATCA TTGAAAGCCT GTTATCTAAG GGGTTTTAA
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| Protein sequence | MSPTLTPIAA VFGIMLLGAI VQKSKLLPSD SDNILNQYVY YVAFPAIMFI ALAQTPFASI
TQWGFICALS LSMVFTYVIA LGLSYWANPE KSALAAIRAL NATFGNTAFI GIPLLGMLFP
DDKSALVAAA IASLLSVVMF AFALVSIEIA TSKALTGKKT DQHQIQASHP LMIMLHALGS
NPIVIASALG VGVSAAALNL PESLSQMLHQ VGNTSSPCAL FAIGMVLTKA MHRDSGSLRW
DKAFIIELNL INFLKLILQP LTAYALLSLF KVEGQWLTMG VILASLPTAA SVYLLAQRYQ
VHTSQSAFAI LISTVLTFIS LPIIESLLSK GF
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