Gene Sden_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1187 
Symbol 
ID4017672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1377983 
End bp1379329 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content50% 
IMG OID637955177 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_562196 
Protein GI91792545 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000122909 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACT TTACCCGACG CGATTTCCTC TCACTCTGTC TTAAAGGTTC GGTCTCCATG 
GCGGCCTTAA GCAGCCTGCA ACTGCAGGCC ATGACTGGCA TGGTCAATAG CGGTCAACTT
AACGACTACA AGGCGCTAGT CTGTGTGTTC CTGTTTGGCG GCAGTGATTC ATTGAATATG
CTTATCCCGT TAGAAGGTGA GCCCCTCAAG GCCTATTTAG CCAGCAGGCA AAACCTAGCG
GTAAGCTCCC CACTGGCGTT ATCTCCCACA AGCCCTGTGG ATGGCGGCAT TGGTTTTCAC
CCCGCCCTCG CCCCCTTGGT GCCGATATTT AATCAACAGC GACTGGGGGT CGTTCCCGCT
GTGGGCAGTT TAATTAGTCC CTTGAGCCTG AGCCAATACC AACAAGGCGG CGCACAAGTC
CCTAAGTTTT TGTTTTCTCA CAACGATCAG CAAGCCACTT GGATGCAAGG CCGGGAAAAA
TCTAGCCTAA ATTACGGGTG GGGCGGCCGA TTACTTGAGA TACTAGAGCA AAACACTAAC
TTTGCCGCCA ATATCTCCCT TGGAGGTAAT AACTTGTGGC AAACTGCGCC CAACACCCGC
CCTTTTGCCA TGAGTCAGTC TGGGGTCACT AAGATACATG CCTTTAATGG CGGCGGGAAT
AAAACCTTAG CGTTTAGAGC ACAGCTGGAG CAAATGCTGG CCGCGGCTAG CCATCCATTG
GGGGCCAGTT ACAGCGACAA ATTAAGTCAA TCTATCACCA ATACTGAGAT GCTTAACCTA
AGCCTAGCCA ATGCCACTAA TCTGGATAAT CTCTTTAGTG ATACGTCACT ATCGAATCAA
CTTAAAGCCG TGGCTAAGAC CTTATCTGTG CAGCCACAGC TTAATGTCGG CAGACAAGTG
TTTTTCGTGA CAATGGGAGG GTTTGACACT CACGACAACC AAGTCACCAC GCAACCGGCC
CTCTTAGGAC AGCTCGCCCA AGGGTTAGCA GAGTTTGATG CCGCCCTCAG CCAGCTTAAT
TTACAGGACA GTGTAACAAG CTTTACCATG TCTGATTTTG GCCGCACCTT AAGCTCAAAT
GGCGATGGTA CAGATCATGG CTGGGCGGGC AATCAACTGG TGATGGGCGG GGCGGTAAAA
GGCGGCGAGA TCTATGGGCA AGTGCTGCAG CAAGCATTAA AGAGTCAATA TGATGTGGGC
GGTGGCAGGC TTATTCCCCA AATAGCCAAT GAGCAATACT TTGCTACCTT AGCCAATTGG
TTTGGTGCAT CCAGTAGTAG CCTGAATGAT CTTTTTCCTA ATCTAAGCAA CTTTAACCAG
CAAACACTGC CCATATTTGC CAGCTAG
 
Protein sequence
MNNFTRRDFL SLCLKGSVSM AALSSLQLQA MTGMVNSGQL NDYKALVCVF LFGGSDSLNM 
LIPLEGEPLK AYLASRQNLA VSSPLALSPT SPVDGGIGFH PALAPLVPIF NQQRLGVVPA
VGSLISPLSL SQYQQGGAQV PKFLFSHNDQ QATWMQGREK SSLNYGWGGR LLEILEQNTN
FAANISLGGN NLWQTAPNTR PFAMSQSGVT KIHAFNGGGN KTLAFRAQLE QMLAAASHPL
GASYSDKLSQ SITNTEMLNL SLANATNLDN LFSDTSLSNQ LKAVAKTLSV QPQLNVGRQV
FFVTMGGFDT HDNQVTTQPA LLGQLAQGLA EFDAALSQLN LQDSVTSFTM SDFGRTLSSN
GDGTDHGWAG NQLVMGGAVK GGEIYGQVLQ QALKSQYDVG GGRLIPQIAN EQYFATLANW
FGASSSSLND LFPNLSNFNQ QTLPIFAS