Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1187 |
Symbol | |
ID | 4017672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1377983 |
End bp | 1379329 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637955177 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_562196 |
Protein GI | 91792545 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000122909 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACT TTACCCGACG CGATTTCCTC TCACTCTGTC TTAAAGGTTC GGTCTCCATG GCGGCCTTAA GCAGCCTGCA ACTGCAGGCC ATGACTGGCA TGGTCAATAG CGGTCAACTT AACGACTACA AGGCGCTAGT CTGTGTGTTC CTGTTTGGCG GCAGTGATTC ATTGAATATG CTTATCCCGT TAGAAGGTGA GCCCCTCAAG GCCTATTTAG CCAGCAGGCA AAACCTAGCG GTAAGCTCCC CACTGGCGTT ATCTCCCACA AGCCCTGTGG ATGGCGGCAT TGGTTTTCAC CCCGCCCTCG CCCCCTTGGT GCCGATATTT AATCAACAGC GACTGGGGGT CGTTCCCGCT GTGGGCAGTT TAATTAGTCC CTTGAGCCTG AGCCAATACC AACAAGGCGG CGCACAAGTC CCTAAGTTTT TGTTTTCTCA CAACGATCAG CAAGCCACTT GGATGCAAGG CCGGGAAAAA TCTAGCCTAA ATTACGGGTG GGGCGGCCGA TTACTTGAGA TACTAGAGCA AAACACTAAC TTTGCCGCCA ATATCTCCCT TGGAGGTAAT AACTTGTGGC AAACTGCGCC CAACACCCGC CCTTTTGCCA TGAGTCAGTC TGGGGTCACT AAGATACATG CCTTTAATGG CGGCGGGAAT AAAACCTTAG CGTTTAGAGC ACAGCTGGAG CAAATGCTGG CCGCGGCTAG CCATCCATTG GGGGCCAGTT ACAGCGACAA ATTAAGTCAA TCTATCACCA ATACTGAGAT GCTTAACCTA AGCCTAGCCA ATGCCACTAA TCTGGATAAT CTCTTTAGTG ATACGTCACT ATCGAATCAA CTTAAAGCCG TGGCTAAGAC CTTATCTGTG CAGCCACAGC TTAATGTCGG CAGACAAGTG TTTTTCGTGA CAATGGGAGG GTTTGACACT CACGACAACC AAGTCACCAC GCAACCGGCC CTCTTAGGAC AGCTCGCCCA AGGGTTAGCA GAGTTTGATG CCGCCCTCAG CCAGCTTAAT TTACAGGACA GTGTAACAAG CTTTACCATG TCTGATTTTG GCCGCACCTT AAGCTCAAAT GGCGATGGTA CAGATCATGG CTGGGCGGGC AATCAACTGG TGATGGGCGG GGCGGTAAAA GGCGGCGAGA TCTATGGGCA AGTGCTGCAG CAAGCATTAA AGAGTCAATA TGATGTGGGC GGTGGCAGGC TTATTCCCCA AATAGCCAAT GAGCAATACT TTGCTACCTT AGCCAATTGG TTTGGTGCAT CCAGTAGTAG CCTGAATGAT CTTTTTCCTA ATCTAAGCAA CTTTAACCAG CAAACACTGC CCATATTTGC CAGCTAG
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Protein sequence | MNNFTRRDFL SLCLKGSVSM AALSSLQLQA MTGMVNSGQL NDYKALVCVF LFGGSDSLNM LIPLEGEPLK AYLASRQNLA VSSPLALSPT SPVDGGIGFH PALAPLVPIF NQQRLGVVPA VGSLISPLSL SQYQQGGAQV PKFLFSHNDQ QATWMQGREK SSLNYGWGGR LLEILEQNTN FAANISLGGN NLWQTAPNTR PFAMSQSGVT KIHAFNGGGN KTLAFRAQLE QMLAAASHPL GASYSDKLSQ SITNTEMLNL SLANATNLDN LFSDTSLSNQ LKAVAKTLSV QPQLNVGRQV FFVTMGGFDT HDNQVTTQPA LLGQLAQGLA EFDAALSQLN LQDSVTSFTM SDFGRTLSSN GDGTDHGWAG NQLVMGGAVK GGEIYGQVLQ QALKSQYDVG GGRLIPQIAN EQYFATLANW FGASSSSLND LFPNLSNFNQ QTLPIFAS
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