Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1183 |
Symbol | |
ID | 4017668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1373084 |
End bp | 1374217 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637955173 |
Product | chaperone protein DnaJ |
Protein accession | YP_562192 |
Protein GI | 91792541 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000246856 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGA GAGATTATTA CGAAGTATTA GGTGTGGGTC GCGATTCGAG TGAGCGTGAC ATCAAGAAAG CCTATAAGCG CTTAGCCATG AAATTTCACC CGGACAGAAA CCCAGGTGAT AAAGCGGCTG AAGCCAGCTT TAAAGAAATC AAAGAAGCCT ATGAAATATT GACCGATGGC GATAAGAAAG CCGCTTATGA TCAGTTTGGT CATGCAGGCG TCGATCCTAA CCGTGGCGGT GGTGGTCATG GTGGCGGTGA TTTCGGTGAC ATCTTTGGTG ATGTGTTCGG TGATATTTTT GGTGGTGGTC GCCGCGGTGG TCAACGTCAA GCGGCTCGTG GTAGCGACTT ACGTTACAAC TTAGAGTTAT CTTTGGAAGA GGCCGTTCGC GGACTCACCA AAGAGCTGCG CATTCCAACC TTAGCGGCCT GTGATTTATG TGATGGTAGT GGCGCGAAAA AGGGCACCTC GGCTTCAAGC TGTGGTACCT GTCATGGTCA AGGCCAAGTG CAGATGCGCC AGGGTTTCTT CGCCGTGCAG CAAGCCTGTC CGACCTGTCA TGGCCGCGGT AAGATCATTA AAGATCCTTG TGGCAAGTGT TACGGTGAAG GCCGGGTCGA GAAGAGCAAA ACTTTATCGG TTAAAATCCC AGCTGGCGTT GATACCGGTG ATCGAATTCG TTTAGCCGGT GAAGGTGAAG CGGGAGAATT TGGTGCCCCA GCAGGTGATT TGTACGTCCA AGTGAGCGTG CGCGAGCACG GAATTTTCAC TCGCGATGGC AATAACCTCT ACTGTGAAGT GCCGATTTCA TTCAGTAAAG CCGCCTTAGG TGGTGAGATT GAAGTGCCGA CATTAGACGG CAAAGTCAGC CTTAAGATCC CAACTGAAAC CCAAACTGGT CGCATGTTCC GTTTACGTGG CAAAGGGGTT AAGTCGGTTC GCAGTCATGC TATCGGCGAT TTGCTTTGTA AAGTCGTGAT GGAAACCCCG GTTAACTTGA GCGAGCAGCA AAAAGAGCTA CTGCGCGAAT TTGAAGCCAG CCTCACAGGG GCGGGAGCCT CTAAGAAACA CAGCCCTAAG GCTGAAGGTT TCTTCGATGG GGTGAAGAAG TTCTTTCAAG ACTTAAATAG CTAA
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Protein sequence | MSKRDYYEVL GVGRDSSERD IKKAYKRLAM KFHPDRNPGD KAAEASFKEI KEAYEILTDG DKKAAYDQFG HAGVDPNRGG GGHGGGDFGD IFGDVFGDIF GGGRRGGQRQ AARGSDLRYN LELSLEEAVR GLTKELRIPT LAACDLCDGS GAKKGTSASS CGTCHGQGQV QMRQGFFAVQ QACPTCHGRG KIIKDPCGKC YGEGRVEKSK TLSVKIPAGV DTGDRIRLAG EGEAGEFGAP AGDLYVQVSV REHGIFTRDG NNLYCEVPIS FSKAALGGEI EVPTLDGKVS LKIPTETQTG RMFRLRGKGV KSVRSHAIGD LLCKVVMETP VNLSEQQKEL LREFEASLTG AGASKKHSPK AEGFFDGVKK FFQDLNS
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