| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1176 |
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| Symbol | |
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| ID | 4017700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1353044 |
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| End bp | 1357909 |
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| Gene Length | 4866 bp |
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| Protein Length | 1621 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637955166 |
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| Product | amino acid adenylation |
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| Protein accession | YP_562185 |
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| Protein GI | 91792534 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAC AATTGTTATC CAAGATTCCT TGGAACTCTA AATCTGCTGC GGTTATTTCA
GAACAAGGTC AATGGAGTTT CTCACAAATA GACACAAAGT CGGATCTTTG GGCAAGTCAT
ATTCTAGAAC AATTAGGGAA AGATATTCGG CACTGGCCCG TGGCAATGCC TATTATTGCG
GAACGTTCAG CAGACTATAT TGTAGCACTT TTAGCCTGCT GGAAACTCGG GATAGGCGTT
GCACCAATAG CCGTTGACAC ACCCATATCT CGTTTGACCC ACATCACTAA TGACTTGAAT
AGCCAGTGGG TAATCAATCT AACAGAGCTC AACATTACTA ACAGCCAGGA AATCCGATTT
GACGCAGGGC TTCCAAATGC AACAGCGTTA CATGAAACCC CATTACAAAA AAGCGGTATA
GCTTATATCA TTTATACTTC CGGCACGACA GGTAAACCCA AAGGGTGTGT GGTCGGAGTC
GAATCAGTAT TGCCAATAAT GCAATCTTAC TGTGATTACT TCGGCTTGAA CGAGTCCTCC
AGAATCACCC TGTCCGCGAA TATAGCATTT GATGCAGCAA TGGCAGACCT AATCCCGGGC
TTAATTAGCG GTGCCAGAAT CTACATCGTC GATCATCAAA TACTTATGCA GCCTAATCGG
TTAATCGAGT ATTACCATCA TCACCAAATT ACCTACAGCT GGATAGCAAC TCCAATAATC
GAAGTCATAA TGTCCACTCC CGACATAACA TTACCTCGCA GTCTAAAGGT GTTGCTGACA
GCAGGACAAA GATTAACTAA GCGACCTCCC AAGGAATGGC ATACTCGGGT TGAAAATGCC
TATGGTCCAA CTGAAACTAC AGTAATAGCA ACGGTGGGCA TAGTTAATCC TAATGGACAT
GGTTTGCCTG ATATTGGTAC CACATTTCTC GGCGTCCATT GTTTGCTAGT CGATCAACGT
CTTCAACCTG TTCAATATGG GGAAGAAGGG GAGCTACTCA TTTATGGTGC AGGGGTTAGC
CGTGGTTATT TAAATCTTCC TGAATTAAAC AATGAAAAGT TTATTCGTAT ACTGGATGCA
CAAGGAAATG AAGTCAGAGC ATATCGTTCA GGCGATTTGT GCAGAGTCAA TAAACAAGGA
AATATTGAGT ATGTCAGCCG TATCGATAAA CAACTGAAAC TGAATGGCAA TCGCTTAGAA
AGTGACGAAA TTATACATCA CATGTTGGCA CAAGAAGGGG TTAAACAAGC GCATGCCATG
ATCCAAAAAA TCGGTGCCCA GGATATTTTG GTCGGTTATA TTGTTGCGGA GAATGCAAGC
CAGCTAGACA CAGTAACACT GCAGTCACTG CTTGGTGAGG AAATGCCTAA GTACATGATT
CCTCAGAAGT TCGTTTTTTT AGATGCATTT CCTCTGACAA GCAATCAAAA GCTCGACGAA
AGTGCCTTGT CTTTGCCTCA AATAGAACGA ACTGAAGCAG ACGAGGATCA AGACGGACTC
TCGTCAGATG AACGAGATTT TTTGTTCTTG TTCAGAAAGA TCATGGGAAT AGATATCGGA
TGGGAAGACA GTTTCTTCCA GCATGGTGGT GCCTCTATTG CAGCAATTTC AATCTCTGCT
GCGGTACACA AGCAATTTGC AATGGGATTA CCTTTTGAGC TCTTTGAACA GCACGGCACT
CCTCAAAGGA TATGGCAATC AATCAATCGT CAGGCTTACC AAGTTACTGA AATCAGCTCT
CACGTCGATG AAACCCTGGA ATATTTTGAT GCGCCCTTAT CTTCTTCTCA GCGTTCGATC
TGGTTTTTCG CCAATATGGA CAATAAAGAT CGAGCCTATC ATGCTAAATC ACAATTAAAG
CTTGTAGGTA AAGTGAATGC AGAAGCTATT GCCTTCGCCT TACAGAAAGT GGTTGACCGT
CATAGTATCT TCCGCACCTC TTTTATTCCC GGAGCTGGTG ATGGAATACA AAGAGTACAT
AAAACCTACC AAGTAAAATT ACAACAGTTT AACCTTTCTT CTTTCCCTTC GGTGGATCGC
GAGCAACGCT TAGAGCACCT GTTACAAGAA GAATTGAACC AGCCATTCGA TCTTTCCTTT
TTGCCATTAG TAAGATGGGC ACTCGTAAAA ATGGATAATG ATGAATCTAT TCTCATCCAT
ATAGAACACC ATCTTGTTCA TGATGGCTGG TCTTACAACT TATTTTTAAA AGATTTTCTT
TTCTATTATC GATCCGTCTT GATGCAAGAA GTCGACGAGT TACCTTTCCC TGCCCAATAC
GCAGATTTTT GCATTACACA GGCAGAATGG TTGAATACAA GGGCTGCAGA AGGACAACTG
AAATATTGGA AAAACCAATT GCAAGGTGCG GCAACAGTTA TTAATTTACC TTCACATAAA
ACGGATACCA ATAATCAGCG TGAAGGAAAA ACACTGCGTA TTCAATTACC AAGAAAGCAA
TGGCATGCAC TAGAAAAATT AGCTGAACAA CGGGGAGAAA CCCCATTCAG TATAATGCTT
GGAATTTACT ATCTAATGTT GTCGCGTTTC TCCGGAGATA AAGACATCTG TGTTGGCTCT
GCATTTGCCA ACCGACAATG GATTCAGGCA GACTCCATTA TCGGTATGAT GATAAACACT
GTTGCTCTTC GCGCAAAGTT TGAAGATCAA ACAAGTATTG ATCAACTTCT CAGTCAAAGC
AGTAGAGTTG TCCATGAAGC CCAGCAAAAT CAGGATATCC CATTTGAATA CCTCGTTAAG
GAAATTAACC CAGAGCGGCC TGTTGGCATA AATCCATTTT TTCAGGTGTT TTTCGGTTTT
CATGATTCTC CCATGCCAGA GATCAACCTA CCGGGAATTA ACCATGCTGA AGTTGTCGAA
GCTATTGATA GTAGTGCGGC TAAATTTGAC TTGTCTGTCG TTGTCATTCC ACGAAAAGGG
CAAGTGGGAG ACGACGATCC TGTGCATTTA CTTTGGGAGT TTAAACGAGC GAAATACCCA
GAGTGGTTAA TCCAAAATAT GATTGAAGAT TATCTGTCTT TACTCAAAAA GGCATTGGAA
AACACCAATA TTTCTCTAAG TCAATTGAAT GCCAATACGC CTGAAATCTG CGGTCCGGAA
GTAGAAATTT TGTCAGGAAC TGTTTTTGAT GCTTTTCGCT TTCAAGCACT GGCTCATCCT
AATCGCACGG CGATTGAATT CCAGGGCCAA GTATATAGTT ACATTAATCT TTTAGTCCGA
GTAGAACAAC AGGCCACATA TCTATCGCAT CTGGAGCTCT CGGCTGGAGA ATATGTTGGA
ATTTGTTTAC CCAGAAGCAT CGACTATGTA AGTTGGATGC TGGCCTGTCA AGCCGCTGGT
GTAGGTTATG TGCCACTGGA CCCTGATTAT CCGGCAGCAC GCATTGAATT CGTTATTAAG
CACAGTCAAA TTACTCATTT GATCACCCAT TCGGACCAGT ATTCTGCAAA TCGCATCCCT
TGTAACGCAA AAAGTGAGCA AAGCCGTAAG GCTATTTCTA TATCAGGTAG TACAGCAATG
TATTGTATTT ATACGTCTGG CTCTACCGGC TTACCTAAAG GGGTTGTTAT CAGCCATGGT
GCATTTTCCA ACTTCATTCA GGCTATGTCC CGAGAATTTA ACTTGCTCCC GGAGCAAAGC
TGGCTAGCAA TTACATCATT TTCTTTCGAT ATTTCAACGT TAGAGCTTTA CTTGCCTTTG
ATCTCAGGGG CCAAAGTTGT TTTAACCTCA CAAGAAGATA GTCGTGACAT AGGATGCTTA
CGTCGCTATT TGCAAAGCGG ACAAATCAGT CATTGCCAAG CGACTCCCAG TACCTGGAAG
ACCCTTATAT CTGATGGTTG GCGACCCACC ACTGACCAAA CTATCCTCTG TGGTGGAGAA
GCTATAGACA TTCAATTAGC TCATCTATTA ACTGAAAAAG GTAATGTCTG TTACAACATG
TACGGCCCCA CAGAAACCAC TGTATGGTCT TCTTTTAAAC AACTTTCAAC AGGTGATGAT
AATTCCCAAA ACAGCAGTAC TTCTTTAGGG TCACCTATTG CCAATACCCA GATTTATATA
CTTGATGATG CATTGCATCA AGTACCGGTT GGTGCCATTG GACAACTTTG GATCGGTGGA
GCGAGTTTGT CTGATGGCTA TTTGCACAAC TCAGAATTAA CAAATGAGCG CTTCGTCTTA
CATCCTGTCA ATGGGAAGCG CATTTATCAG ACTGGCGATT TAGCTTCCAT TGATGGGTAC
GGCGAATTGC AATTTCACGG ACGAGCAGAT CAGCAAGTAA AGCTGTCAGG GTTTCGTATC
GAGTTGGAGG AAATAGAACA GATTATTAAA CAGTTAGCCG AAGTTAATCA GGTAGCTGTG
GTTATCCGAA ATGTCGCTGA AACACCACAA CTGATTGCTT TTTTTTCTGG AGAATGTGAT
GAATCAACCG TTTTGACACA ATGTCGTCAA AAGCTACCCG GCTATATGAT CCCTCATAAA
GTTATTACGC TTGACACATT ACCGTTAACG CCGAATCGCA AGGTTGATAA AAAAGCATTA
CCGACAGATC TGCAACCATC TGATGTTATC AATACACCGC AAACACCTAC GGAAGAACAG
CTCGAAACGA TATTAAGTTC CCATCTTGGC TATCCCCGAA TTGATACCCA ACGCAATTTT
TATAAGTTGG GAGGTAATTC TTTAATGGCA ATGAAGGTAT GTGTCAGCAT TGAACGAGAA
ATGAATGTAT CGCTAAAAGC CATCGATTTC ATCGAACTCG GCAGTATCAC AGCTGTGGCC
GCCTTTATTG ACGCAACCTC AGGCGAAACA TCCGAAATGG AATTTGTAGA GGAAATGACA
ATATGA
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| Protein sequence | MMEQLLSKIP WNSKSAAVIS EQGQWSFSQI DTKSDLWASH ILEQLGKDIR HWPVAMPIIA
ERSADYIVAL LACWKLGIGV APIAVDTPIS RLTHITNDLN SQWVINLTEL NITNSQEIRF
DAGLPNATAL HETPLQKSGI AYIIYTSGTT GKPKGCVVGV ESVLPIMQSY CDYFGLNESS
RITLSANIAF DAAMADLIPG LISGARIYIV DHQILMQPNR LIEYYHHHQI TYSWIATPII
EVIMSTPDIT LPRSLKVLLT AGQRLTKRPP KEWHTRVENA YGPTETTVIA TVGIVNPNGH
GLPDIGTTFL GVHCLLVDQR LQPVQYGEEG ELLIYGAGVS RGYLNLPELN NEKFIRILDA
QGNEVRAYRS GDLCRVNKQG NIEYVSRIDK QLKLNGNRLE SDEIIHHMLA QEGVKQAHAM
IQKIGAQDIL VGYIVAENAS QLDTVTLQSL LGEEMPKYMI PQKFVFLDAF PLTSNQKLDE
SALSLPQIER TEADEDQDGL SSDERDFLFL FRKIMGIDIG WEDSFFQHGG ASIAAISISA
AVHKQFAMGL PFELFEQHGT PQRIWQSINR QAYQVTEISS HVDETLEYFD APLSSSQRSI
WFFANMDNKD RAYHAKSQLK LVGKVNAEAI AFALQKVVDR HSIFRTSFIP GAGDGIQRVH
KTYQVKLQQF NLSSFPSVDR EQRLEHLLQE ELNQPFDLSF LPLVRWALVK MDNDESILIH
IEHHLVHDGW SYNLFLKDFL FYYRSVLMQE VDELPFPAQY ADFCITQAEW LNTRAAEGQL
KYWKNQLQGA ATVINLPSHK TDTNNQREGK TLRIQLPRKQ WHALEKLAEQ RGETPFSIML
GIYYLMLSRF SGDKDICVGS AFANRQWIQA DSIIGMMINT VALRAKFEDQ TSIDQLLSQS
SRVVHEAQQN QDIPFEYLVK EINPERPVGI NPFFQVFFGF HDSPMPEINL PGINHAEVVE
AIDSSAAKFD LSVVVIPRKG QVGDDDPVHL LWEFKRAKYP EWLIQNMIED YLSLLKKALE
NTNISLSQLN ANTPEICGPE VEILSGTVFD AFRFQALAHP NRTAIEFQGQ VYSYINLLVR
VEQQATYLSH LELSAGEYVG ICLPRSIDYV SWMLACQAAG VGYVPLDPDY PAARIEFVIK
HSQITHLITH SDQYSANRIP CNAKSEQSRK AISISGSTAM YCIYTSGSTG LPKGVVISHG
AFSNFIQAMS REFNLLPEQS WLAITSFSFD ISTLELYLPL ISGAKVVLTS QEDSRDIGCL
RRYLQSGQIS HCQATPSTWK TLISDGWRPT TDQTILCGGE AIDIQLAHLL TEKGNVCYNM
YGPTETTVWS SFKQLSTGDD NSQNSSTSLG SPIANTQIYI LDDALHQVPV GAIGQLWIGG
ASLSDGYLHN SELTNERFVL HPVNGKRIYQ TGDLASIDGY GELQFHGRAD QQVKLSGFRI
ELEEIEQIIK QLAEVNQVAV VIRNVAETPQ LIAFFSGECD ESTVLTQCRQ KLPGYMIPHK
VITLDTLPLT PNRKVDKKAL PTDLQPSDVI NTPQTPTEEQ LETILSSHLG YPRIDTQRNF
YKLGGNSLMA MKVCVSIERE MNVSLKAIDF IELGSITAVA AFIDATSGET SEMEFVEEMT
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