Gene Sden_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1168 
Symbol 
ID4017692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1343878 
End bp1345578 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content40% 
IMG OID637955158 
Productradical SAM family protein 
Protein accessionYP_562177 
Protein GI91792526 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC AAAATAACGA TACCATTCCT ATCAGAATAC TCCAGCAAAC TGCGCTTGAA 
ATTAATGTAC CTCAGAACAG CTCGCTTAGA GAATATTTAG GCACAAAAGA TGAAACCTCC
AGAACACCCT GTGCTCGGAA ACCACCTAAA TATGAAGTTT ACAATCAAGG TTATTCTGCG
CCACCTAAAG TGTTACTGGT ATTGCCTCCT ATGTGTATGT ATGAAGGCGC AGTTAAGCGA
CTCATTCCGC CTTTAGGTCT TTGCTATATC GCTGCCAATA TGCTCAAACA TGGCTATGAA
GTTGATATTC TGGACTGCAT TGCTGAAGGT TATGAAACAG AAACATTAAT TGCACCTAAT
ATTTACCGTC TGGGCATTAC CGAGGAGGAA TTCGCTGAAC GTATTGAAAG TAGCGATCAT
GATGTAATTT GTTTTTCGAT GATATATTCA TCTGATATAG AGAATCTGTA CCGCTACGCA
AAAATTGTTA AGCAGGTGGC AAAGGACAAA GTGGTCATGG CTGGAGGAAT GCATGCCTCT
ATTTATCCGG AACAATTCAT TCGGGATGCA GGACAATGGG ATGATCAACC AGTTATTGAT
TTTGTTATTC GTGGAGAAGG TGAATTTCGT CTCATTCACT TTATTGAAAA CCTTCAACAG
GGAAGGTTCG ATATCCATGC TGACGGACTA GTAGGCTGGC ATGATGGGGA CGTTTTTATT
AATCCTCAGT ATACCCAGAT TCAAGATCTG AATGACCTGC CTTTTCCTGC ATATCATAAG
CTTCCACTGG AAAAATATTT TCATCACAAC GTACCATTTT CACCTTACCC TCGCGGTAAT
CGGGTTATGC AAATATATAC CTCTCGTGGC TGTCCTATTG GCTGTACTTT TTGTTCAAGT
ACAAACTTCA ATAAAGCCTA TCGGAGTCGA AGTGTTGAAA ATGTTATAGA GGAAATCAAA
TTCTATCAGC GTGAATACGG CATTGATGAG ATTCAGTTTG CAGATGACAA TTTAACCTTT
GATAAGAAGC GATCAATTAA ACTTTTTAAT GAGCTCGAAA AACTCAATAT TCAGTGGTGT
ACTCCAAACG GAATTATGAT AAACACCCTT GATGAACAAG TACTTGATGC CATGATTCGT
TCGGGTCTTT ATCAAATAAC CCTCTCACTG GATAGTGGGA ATGCCGATAC TTTGAGAGAA
AAACACCGCA AGCCAGTAAA ACTCCAACGT GTGCCAGTCT TGATGGATTA TTTGAAAAAA
CGAGGGGTAC TCATGCACGG GACTCTGGTG GTCGGAATGC CGGGGGAAAC GGTAGAGGAT
ATCGAGAAGG GGTTCCGTTA TGTGGAGACA TTACCATTTA ATTCAATGAA TGTTTTTATT
GCTCAGGCTC TTCCCGGTTC AGAGCTGTTT GAGGTGTCAT TACAAAACGG CGCTATCACC
TATGAAACTT CACTCTATAT TGATACTGCG CAATCGACAT TAAAGCTAAC AGATATTGAT
GGAAAAGTGT TGGAAGCGTT AGTGGAAAAT TTTCTTAGTG CCTACAATCG AAAAATATAT
CAACGGGATA CTGAGACCTG GAATAAAAAG TATCAGGATC ACCAAAAACG AATGGCAAAG
ATCTGCATAG GAAAAGCATC TGCCAATACT TCAGCCATTA TTGAGGCATC AAATGAATCA
AAAGAAAGTG AATGGGCTTA G
 
Protein sequence
MKEQNNDTIP IRILQQTALE INVPQNSSLR EYLGTKDETS RTPCARKPPK YEVYNQGYSA 
PPKVLLVLPP MCMYEGAVKR LIPPLGLCYI AANMLKHGYE VDILDCIAEG YETETLIAPN
IYRLGITEEE FAERIESSDH DVICFSMIYS SDIENLYRYA KIVKQVAKDK VVMAGGMHAS
IYPEQFIRDA GQWDDQPVID FVIRGEGEFR LIHFIENLQQ GRFDIHADGL VGWHDGDVFI
NPQYTQIQDL NDLPFPAYHK LPLEKYFHHN VPFSPYPRGN RVMQIYTSRG CPIGCTFCSS
TNFNKAYRSR SVENVIEEIK FYQREYGIDE IQFADDNLTF DKKRSIKLFN ELEKLNIQWC
TPNGIMINTL DEQVLDAMIR SGLYQITLSL DSGNADTLRE KHRKPVKLQR VPVLMDYLKK
RGVLMHGTLV VGMPGETVED IEKGFRYVET LPFNSMNVFI AQALPGSELF EVSLQNGAIT
YETSLYIDTA QSTLKLTDID GKVLEALVEN FLSAYNRKIY QRDTETWNKK YQDHQKRMAK
ICIGKASANT SAIIEASNES KESEWA