Gene Sden_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1150 
Symbol 
ID4017323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1320400 
End bp1320894 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content50% 
IMG OID637955140 
Productphosphatidylglycerophosphatase 
Protein accessionYP_562159 
Protein GI91792508 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.313843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTC TCACCCAAGA CGCTAATGTT GCTAAGTTAT CCCTAAAAAA CCCGGTGCAC 
TTTCTTGCCT TGGGTTTTGG CAGCGGGCTG GCAGCCAAAG CGCCTGGTAC CTTTGGTACC
CTTGCCGCCG TTCCCCTGTA CCTATTGCTG GCACAACTTA GCCTTCCCTG GTATCTGGCC
ATCACGGTAT TTTGCTCTGT TATCGGCATT TATATTTGCG GGCAAGCCGC TAAAGACATG
GGGGTGCACG ATCATGGTGC TATCGTCTGG GATGAAGTCG CCGGTTTATT GATTACTATG
ATTGCCGCCC CACAAGGCGT TATCTGGCTT GCTATAGGCT TTGGCCTATT TCGCTTCTTC
GATATTGTTA AACCTTGGCC CATACGTTGG CTCGATGCCA AAGTCCATGG CGGCTTTGGC
ATAATGATCG ACGATGTGCT AGCCGGTGTG TTCGCCTTTT TGAGCTTACA GCTCATCATC
TTCTGGTTAG GCTAA
 
Protein sequence
MTFLTQDANV AKLSLKNPVH FLALGFGSGL AAKAPGTFGT LAAVPLYLLL AQLSLPWYLA 
ITVFCSVIGI YICGQAAKDM GVHDHGAIVW DEVAGLLITM IAAPQGVIWL AIGFGLFRFF
DIVKPWPIRW LDAKVHGGFG IMIDDVLAGV FAFLSLQLII FWLG