Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1149 |
Symbol | |
ID | 4017322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1319444 |
End bp | 1320400 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637955139 |
Product | thiamine-monophosphate kinase |
Protein accession | YP_562158 |
Protein GI | 91792507 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0611] Thiamine monophosphate kinase |
TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.017464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGAAT TCCAACTCAT CGAGCACTAT TTTCATCGCC AAAATCAGCA GCGCCGCGAC GTGAAGCTGG GCATAGGTGA TGACTGCGCC TTAGTTCAAG TCCCCGAAAA CAAATCCCTG GCCATTTCCT GCGATACCTT AGTCGAAGGT GTGCATTTCT TTGCCGATAT GCCAGCAAGA GAACTGGGCT ACAAATCCTT AGCGGTGAAT CTGTCTGACT TAGCGGCGAT GGGCGCAGAG CCAGCATGGA TGACCTTAGC GCTAACCTTA CCTGAGGTTA ACCAAACCTG GCTGCAAGGC TTTAGCGAAG GCTTATTTGA AGCGGCGGAT TACTATGGCG TCAGTTTGAT TGGTGGTGAT ACCACTCGCG GACCGTTAAG CATCAATATC ACCATCCATG GTCTAGTGCC CAATGACACA GCGCTCAAGC GCAGTGGCGC CAAAGTGGGA GATTGGATTT ATGTCACCGG CACCTTAGGG GATTCCGCCC TAGGTTTGAA TATTTTGGCT GGCAAGGTGC AAGTAGATGC CGACAATAAA GACTACTTAA TTGGTCGTCA TTATCGCCCC ACACCTAGGG TGCTAGCGGG ACAGTCATTG CGCTCATTAG CCAGTAGCGC CATCGACTTA TCCGATGGCT TGATGTCAGA TCTTGGCCAT ATTCTTAAGG CTTCAGAAGT GGGGGCCATC ATCGATGTCG GCAGTATTCC ACAGTCTGAA GCCATGACCA GCAGTGTTAG CCAAGATGAT GCCCTAAGTT ACGGCCTCAC CGGCGGCGAA GATTACGAAC TGTTATTTAC TGTGCCTGAA TCTCAGCGGG GGGCGCTGGA TACTGCACTC TTGCATGCTG GGGTTAAGTT CAGCAAAATT GGTCAAATCT CAGCTGGGCG TGAACTTAAA TTGCTCCTCG ATGGCCAAGC ATTTATCCCC AATTTCAGTG GTTTTGAGCA TTTTTAA
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Protein sequence | MKEFQLIEHY FHRQNQQRRD VKLGIGDDCA LVQVPENKSL AISCDTLVEG VHFFADMPAR ELGYKSLAVN LSDLAAMGAE PAWMTLALTL PEVNQTWLQG FSEGLFEAAD YYGVSLIGGD TTRGPLSINI TIHGLVPNDT ALKRSGAKVG DWIYVTGTLG DSALGLNILA GKVQVDADNK DYLIGRHYRP TPRVLAGQSL RSLASSAIDL SDGLMSDLGH ILKASEVGAI IDVGSIPQSE AMTSSVSQDD ALSYGLTGGE DYELLFTVPE SQRGALDTAL LHAGVKFSKI GQISAGRELK LLLDGQAFIP NFSGFEHF
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