| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1148 |
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| Symbol | nusB |
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| ID | 4017321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1318945 |
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| End bp | 1319346 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637955138 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_562157 |
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| Protein GI | 91792506 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000166968 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCTT CTGAGCGCCG TAAGGCTCGC CGTTTAGCTG TGCAGGCTAT TTATTCATGG
CAATTAAGCA AAAACAATGT TGCTGACGTT GAACATGAAT TTATCACAGA GCAAAATATT
GATGGCGTGG ATGTCGCTTA TTTTCGTGAA TTATTGGCGG GTGTGGCTTC TAAGCATGAA
CAAATTGATG ACTTGCTTAG GCCACATTTA GACCGTAAAT TTGAAGACGT TTCTCCAGTG
GAGAAGGCGA TTGTCCGTTT GGCAGGTTAC GAGTTGACCT TCCGTAAAGA TGTCCCTTAC
AAAGTGGCCA TTAACGAAGC CATTGAGCTT GCAAAAGCTT TTGGTGCGGA CGATAGCCAT
AAGTTTGTTA ACGGACTATT AGATAAACTC GTTAGACGTT AA
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| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSKNNVADV EHEFITEQNI DGVDVAYFRE LLAGVASKHE
QIDDLLRPHL DRKFEDVSPV EKAIVRLAGY ELTFRKDVPY KVAINEAIEL AKAFGADDSH
KFVNGLLDKL VRR
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