Gene Sden_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1146 
Symbol 
ID4017319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1317229 
End bp1318332 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content49% 
IMG OID637955136 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_562155 
Protein GI91792504 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000372941 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTAC ATAGCATAGA AGAAATCATC GAAGACATAC GTCAGGGCAA AATGGTTATT 
CTGATGGACG ATGAAGACAG GGAAAATGAG GGCGACCTTA TTATGGCGGC CGATTTAGTG 
ACCCCAGAGG CCATTAACTT CATGGCCACC TATGGCCGCG GCCTAATTTG CCAGACCATG 
ACTAAGGCGC GCTGTCAGCA GTTGAATCTT CCTTTGATGG TGACCAACAA TAACGCTCAA 
TTCTCCACTA ACTTCACTGT GTCTATCGAA GCCGCTACCG GTGTGACGAC GGGGATCTCT 
GCCCACGATC GCGCTGTGAC CGTAAAAGCT GCCGTGGCTA AAGATGCCAA AGCTTCTGAT 
TTAGTTCAGC CTGGGCATAT ATTCCCATTA ATGGCCCAAG ATGGCGGCGT GCTCATTCGC 
GCTGGTCACA CGGAAGCGGG TTGTGATTTG GCTCGCCTTG CTGGCCTTGA GCCATCAGGG 
GTTATCGTTG AAATTTTAAA TGAAGATGGC ACCATGGCGC GCTGTCCAGA CCTTGAAATC 
TTCAGTGAAA AACACGGCAT TAAGATGGGC ACGATTGCAG ACCTTATCGA ATACCGCAAT 
ACCAAAGAAA CCAGTGTGGT GCGTGAAGCC GAATGTAAAT TGCCGACACG TTTCGGTGAA 
TTCAACATGG TGACCTTCAG AGATACTATC GATAACCAGT TGCATTATGC TTTGGTGAAA 
GGCGATGTGA ATCACAATCC ATTAGTGAGA GTGCATCTGC AAAATACCTT CAACGATTTA 
CTGCATTCTG AGCGAGATCA AAAGCGCAGC TGGCCTTTAG AGACAGCTAT GGAGCGCATC 
GCCACTGAAG GCGGGGTACT TGTGTTGCTG GGTAACCGTG AACATTCAAG CGAAATCCTC 
GCTAAAGTGA AAGCCTTTGA AGCCGAAGAC AAAGGTGAAG CGCCCGTCTC TGCGAAATGG 
CAAGGGACAT CGCGTCGTGT GGGGGTGGGA TCGCAAATTT TGGCAAGCCT AGGGGTGAGT 
AAGATGCGCC TATTGAGCTC GCCTAAGCGT TATCACTCAC TCTCAGGTTT TGGTTTAGAA 
GTGACTGATT ATATTTCTGA ATAA
 
Protein sequence
MALHSIEEII EDIRQGKMVI LMDDEDRENE GDLIMAADLV TPEAINFMAT YGRGLICQTM 
TKARCQQLNL PLMVTNNNAQ FSTNFTVSIE AATGVTTGIS AHDRAVTVKA AVAKDAKASD 
LVQPGHIFPL MAQDGGVLIR AGHTEAGCDL ARLAGLEPSG VIVEILNEDG TMARCPDLEI 
FSEKHGIKMG TIADLIEYRN TKETSVVREA ECKLPTRFGE FNMVTFRDTI DNQLHYALVK 
GDVNHNPLVR VHLQNTFNDL LHSERDQKRS WPLETAMERI ATEGGVLVLL GNREHSSEIL 
AKVKAFEAED KGEAPVSAKW QGTSRRVGVG SQILASLGVS KMRLLSSPKR YHSLSGFGLE 
VTDYISE