| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1145 |
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| Symbol | |
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| ID | 4017318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1316500 |
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| End bp | 1317153 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955135 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_562154 |
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| Protein GI | 91792503 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000276723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTACCG GAATAATCGA AGCCCTAGGG ACATTAACTA AGATTGAGCG CCACGGTCAG
GATATTCGCC TCACTGTGGA TAGCGGCAAG CTTGACTTAA GTGATGTTAA ACTCGGTGAT
AGCATTGCCA CTAATGGCGT GTGCCTAACT GTCGTTCAGA GCCTTAAACA GGGGTACATG
GCCGACGTGT CTGCAGAAAC TGTGGCATTG ACAGGCTTTG CTCGCTATAA AGTGGGCCAG
AAGGTTAATC TTGAAAAAGC CCTTACCGCC ACCACACGTT TAGGCGGCCA CATGGTCAGC
GGTCATGTGG ATGGCATGGC AGAGGTGATG CAGCGACAAG CTCGTGGCAA GGCCATCGAG
TTTTGGTTAA AAGCGCCCAG TGAGCTTGCC CGCTATATTG CCCATAAAGG TTCAGTGACC
ATAGATGGCG TTAGTCTTAC GGTTAATGAA GTCGATGGTG ATAATTTCAG GCTCACTATC
GTGCCGCACA CTGCTGGCGA AACCACACTA TTAGATTTAA ACACGGGTGA CAGGGTAAAC
CTTGAAGTGG ATCTTATCGC CCGCTACCTT GAGCGTTTGA TGGGGGCGAA AGCACCTTCG
GCCGAAGGCG GCGTGACCAT GGAGCTACTG GCACGCTCAG GATTTATGAA ATAG
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| Protein sequence | MFTGIIEALG TLTKIERHGQ DIRLTVDSGK LDLSDVKLGD SIATNGVCLT VVQSLKQGYM
ADVSAETVAL TGFARYKVGQ KVNLEKALTA TTRLGGHMVS GHVDGMAEVM QRQARGKAIE
FWLKAPSELA RYIAHKGSVT IDGVSLTVNE VDGDNFRLTI VPHTAGETTL LDLNTGDRVN
LEVDLIARYL ERLMGAKAPS AEGGVTMELL ARSGFMK
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