| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1141 |
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| Symbol | |
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| ID | 4017314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1311455 |
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| End bp | 1313122 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955131 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_562150 |
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| Protein GI | 91792499 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.776403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAAT TTGTATACAG CATGCTTAGA GTGGGCAAAA TTGTCCCACC CAAGAAGCAA
ATTCTTAAAG ACATCTCCTT AAGTTTCTTC CCCGGCGCCA AGATTGGTGT GTTAGGTCTT
AACGGCTCTG GTAAATCAAC CCTACTGCGC ATCATGGCAG GCCTTGACAC TGAAATCGAA
GGTGAAGCTC GCCCTATGCC AGGCCTTAAG ATAGGTTATT TGCCTCAAGA GCCTAAGCTT
AATGAAGAGC AAACGGTGCG CGAAGCCATA GAAGAAGCGG TAGGCGTGGC CAAAAATGCC
CTTAAGCGTC TTGATGAAGT CTATGCACTT TACGCCGAAC CCGATGCAGA CTTTGATGCC
CTTGCCAAAG AACAAGGTGA GCTTGAAGCC ATTATCCAAG CTCAAGATGC TCATAACTTA
GATCATATCT TAGACAGAGC CGCCGATGCG CTACGTTTGC CTGAGTGGGA TGCCAAAATC
GGCGTGCTGT CTGGGGGTGA ACGTCGCCGG GTGGCCTTAT GTCGTCTACT GCTAGAAAAG
CCTGAAATGC TATTGCTCGA TGAACCGACC AACCACTTGG ACGCTGAATC TGTGGCTTGG
CTTGAACATT TCTTGCAAGA ATACTCAGGC ACTGTGGTGG CCATTACCCA CGATAGATAC
TTCCTCGATA ACGCAGCAGG CTGGATTTTA GAACTTGACC GCGGCGAAGG TATTCCATGG
GAAGGTAACT ACTCATCTTG GCTTGAACAA AAAGATAACC GCCTAAAGCA GGAGTCATCC
ACTGAAAGCG CCCGTCAGAA GACCATAGCC AAGGAATTGG AATGGGTGCG TCAAGGCGCA
AAAGGTCGTC AGTCTAAAGG CAAGGCCCGT ATGGCGCGCT TTGAAGAATT GAACACCAAT
GATTACCAAA AACGCAATGA AACCAACGAG CTCTTCATTC CGCCAGGACC ACGCTTAGGC
GATAAAGTGA TCGAAGTCAC TAATCTGACC AAATCTTACG GCGATCGCGT CTTGATTGAT
GACTTGTCAT TCTCTGTGCC TAAGGGCGCC ATTGTCGGCA TTATCGGTGC TAACGGCGCG
GGTAAATCGA CCCTGTTCAG AATGATTTCT GGCGATGAGC AACCAGACAG CGGCAGCATT
TCTGTGGGCG AGTCAGTGCA ATTAGCCTCG GTTGAGCAGT TCCGCGACTC AATGAATGAC
AAGAACACGG TTTGGCAGGA AATCTCTGGC GGCCAAGACA TAATGCGCAT CAACAATATG
GAAATCCCAA GCCGTGCTTA CGTGGGCCGG TTTAACTTCC GTGGCGGCGA TCAGCAGAAA
ATCATCGGCA CTTTATCCGG CGGTGAGCGT AACCGCGTCC ACTTAGCCAA GCTATTACAA
GCGGGCGGTA ACGTACTATT ACTCGATGAA CCCACCAACG ACTTAGACGT TGAAACCTTG
CGCGCACTGG AAGAAGCCTT ATTGGAATTC CCAGGTTGCG CCATGGTGAT TTCACACGAT
CGTTGGTTCC TCGACCGTAT CGCTACCCAC ATCTTAGATT ATCGCGACGA AGGCAAGGTG
AACTTCTACG AAGGTAACTT CACCGAATAC TCCACTTGGC TCAAAGCCAC CTACGGCGCC
GATATCGTCG AACCCCACCG CTTGAAATAC AAGCGTATGG TGAAGTAA
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| Protein sequence | MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGLDTEIE
GEARPMPGLK IGYLPQEPKL NEEQTVREAI EEAVGVAKNA LKRLDEVYAL YAEPDADFDA
LAKEQGELEA IIQAQDAHNL DHILDRAADA LRLPEWDAKI GVLSGGERRR VALCRLLLEK
PEMLLLDEPT NHLDAESVAW LEHFLQEYSG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
EGNYSSWLEQ KDNRLKQESS TESARQKTIA KELEWVRQGA KGRQSKGKAR MARFEELNTN
DYQKRNETNE LFIPPGPRLG DKVIEVTNLT KSYGDRVLID DLSFSVPKGA IVGIIGANGA
GKSTLFRMIS GDEQPDSGSI SVGESVQLAS VEQFRDSMND KNTVWQEISG GQDIMRINNM
EIPSRAYVGR FNFRGGDQQK IIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEALLEF PGCAMVISHD RWFLDRIATH ILDYRDEGKV NFYEGNFTEY STWLKATYGA
DIVEPHRLKY KRMVK
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