Gene Sden_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1141 
Symbol 
ID4017314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1311455 
End bp1313122 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content50% 
IMG OID637955131 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_562150 
Protein GI91792499 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.776403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAT TTGTATACAG CATGCTTAGA GTGGGCAAAA TTGTCCCACC CAAGAAGCAA 
ATTCTTAAAG ACATCTCCTT AAGTTTCTTC CCCGGCGCCA AGATTGGTGT GTTAGGTCTT
AACGGCTCTG GTAAATCAAC CCTACTGCGC ATCATGGCAG GCCTTGACAC TGAAATCGAA
GGTGAAGCTC GCCCTATGCC AGGCCTTAAG ATAGGTTATT TGCCTCAAGA GCCTAAGCTT
AATGAAGAGC AAACGGTGCG CGAAGCCATA GAAGAAGCGG TAGGCGTGGC CAAAAATGCC
CTTAAGCGTC TTGATGAAGT CTATGCACTT TACGCCGAAC CCGATGCAGA CTTTGATGCC
CTTGCCAAAG AACAAGGTGA GCTTGAAGCC ATTATCCAAG CTCAAGATGC TCATAACTTA
GATCATATCT TAGACAGAGC CGCCGATGCG CTACGTTTGC CTGAGTGGGA TGCCAAAATC
GGCGTGCTGT CTGGGGGTGA ACGTCGCCGG GTGGCCTTAT GTCGTCTACT GCTAGAAAAG
CCTGAAATGC TATTGCTCGA TGAACCGACC AACCACTTGG ACGCTGAATC TGTGGCTTGG
CTTGAACATT TCTTGCAAGA ATACTCAGGC ACTGTGGTGG CCATTACCCA CGATAGATAC
TTCCTCGATA ACGCAGCAGG CTGGATTTTA GAACTTGACC GCGGCGAAGG TATTCCATGG
GAAGGTAACT ACTCATCTTG GCTTGAACAA AAAGATAACC GCCTAAAGCA GGAGTCATCC
ACTGAAAGCG CCCGTCAGAA GACCATAGCC AAGGAATTGG AATGGGTGCG TCAAGGCGCA
AAAGGTCGTC AGTCTAAAGG CAAGGCCCGT ATGGCGCGCT TTGAAGAATT GAACACCAAT
GATTACCAAA AACGCAATGA AACCAACGAG CTCTTCATTC CGCCAGGACC ACGCTTAGGC
GATAAAGTGA TCGAAGTCAC TAATCTGACC AAATCTTACG GCGATCGCGT CTTGATTGAT
GACTTGTCAT TCTCTGTGCC TAAGGGCGCC ATTGTCGGCA TTATCGGTGC TAACGGCGCG
GGTAAATCGA CCCTGTTCAG AATGATTTCT GGCGATGAGC AACCAGACAG CGGCAGCATT
TCTGTGGGCG AGTCAGTGCA ATTAGCCTCG GTTGAGCAGT TCCGCGACTC AATGAATGAC
AAGAACACGG TTTGGCAGGA AATCTCTGGC GGCCAAGACA TAATGCGCAT CAACAATATG
GAAATCCCAA GCCGTGCTTA CGTGGGCCGG TTTAACTTCC GTGGCGGCGA TCAGCAGAAA
ATCATCGGCA CTTTATCCGG CGGTGAGCGT AACCGCGTCC ACTTAGCCAA GCTATTACAA
GCGGGCGGTA ACGTACTATT ACTCGATGAA CCCACCAACG ACTTAGACGT TGAAACCTTG
CGCGCACTGG AAGAAGCCTT ATTGGAATTC CCAGGTTGCG CCATGGTGAT TTCACACGAT
CGTTGGTTCC TCGACCGTAT CGCTACCCAC ATCTTAGATT ATCGCGACGA AGGCAAGGTG
AACTTCTACG AAGGTAACTT CACCGAATAC TCCACTTGGC TCAAAGCCAC CTACGGCGCC
GATATCGTCG AACCCCACCG CTTGAAATAC AAGCGTATGG TGAAGTAA
 
Protein sequence
MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGLDTEIE 
GEARPMPGLK IGYLPQEPKL NEEQTVREAI EEAVGVAKNA LKRLDEVYAL YAEPDADFDA
LAKEQGELEA IIQAQDAHNL DHILDRAADA LRLPEWDAKI GVLSGGERRR VALCRLLLEK
PEMLLLDEPT NHLDAESVAW LEHFLQEYSG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
EGNYSSWLEQ KDNRLKQESS TESARQKTIA KELEWVRQGA KGRQSKGKAR MARFEELNTN
DYQKRNETNE LFIPPGPRLG DKVIEVTNLT KSYGDRVLID DLSFSVPKGA IVGIIGANGA
GKSTLFRMIS GDEQPDSGSI SVGESVQLAS VEQFRDSMND KNTVWQEISG GQDIMRINNM
EIPSRAYVGR FNFRGGDQQK IIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEALLEF PGCAMVISHD RWFLDRIATH ILDYRDEGKV NFYEGNFTEY STWLKATYGA
DIVEPHRLKY KRMVK