| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1137 |
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| Symbol | |
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| ID | 4017419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1306571 |
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| End bp | 1307461 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955128 |
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| Product | phage integrase |
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| Protein accession | YP_562147 |
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| Protein GI | 91792496 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAT CCGAGCAACA ACGCTTCGAT TGTCTTTATC AACAACATCT TACCAACTTA
ACCCTGCAAG GCAAGCGCCC TGCTACCATC GATGCCTACA GTCGGGCTGT TAGGCGTATA
GCGGCCTACT TCGACTGCTG CCCCGACAAG CTCACAACTG CTGATTTAAA ACGTTACTTC
GCCGATTTAA TTGCCTCTCA TTCATGGAGT ACCGTGAAAC TTGACCGTAA TGGTCTGCAA
TTCTTCTATC GCCATGTGCT CAACCAAGCT TGGCAGTGGC TCAGCATCGT CAAGCCGCCG
CAAGTCAACC ATCTGCCCGA TATCCTCACC CCCGCTGAAG TGTCTATGGT CATTAGCCTC
ACTCACAAGT TGCGTTATCA AGTGTGCTTT TTAACCCTTT ACAGCATGGG ATTACGTCTC
GGTGAAGCGG TCTCGTTGCA GATTGGCGAT ATCGACTCAC AGTTGATGCA GGTGCATATC
CGTGATGCCA AAGGCGGTAA GGATAGACTG ATTCCTTTAC CGCAACGCAC CTTGCAGGCA
CTGCGTTATT ACTGGCAAAC CCATCGCCAT CCTCGTTATT TATTTCCGGG TAAGGATGGT
AAGCCAAATT CACTGATGGA CCGTGGTGGC ATTCAGAAAG CGATGAAAAA AGTGATTAGT
GAATGCCATA TTCACAAATC CATCAGCCCA CATAATTTAC GTCACAGCTA TGCCACTCAT
CTGCTCGAAC AAGGGTTAGA TTTACGCTCA GTGCAGCAGT TACTCGGCCA CAACAGCCTC
AACACCACCG CCCGTTACAC CCGGCTCACC ACCATCACTC GCAAGAACAC TGTCGAATCG
ATTAACCAAC TGACGAATAA TCTGGTATTG ATGTGGGAGT GTGAACAATG A
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| Protein sequence | MNPSEQQRFD CLYQQHLTNL TLQGKRPATI DAYSRAVRRI AAYFDCCPDK LTTADLKRYF
ADLIASHSWS TVKLDRNGLQ FFYRHVLNQA WQWLSIVKPP QVNHLPDILT PAEVSMVISL
THKLRYQVCF LTLYSMGLRL GEAVSLQIGD IDSQLMQVHI RDAKGGKDRL IPLPQRTLQA
LRYYWQTHRH PRYLFPGKDG KPNSLMDRGG IQKAMKKVIS ECHIHKSISP HNLRHSYATH
LLEQGLDLRS VQQLLGHNSL NTTARYTRLT TITRKNTVES INQLTNNLVL MWECEQ
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