Gene Sden_1133 details

Gene Information

• Locus tag: Sden_1133
• ID: 4017415
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1301742
• End bp: 1302317
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637955124
• Product: Sel1
• Protein accession: YP_562143
• Protein GI: 91792492
• COG category: [R] General function prediction only
• COG ID: [COG0790] FOG: TPR repeat, SEL1 subfamily

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTCGA ACTCAATTAA ATCTATCGCT ATTGTATTGC TGTGTCTGAG TAGCTTTTTT 
ACTCACGCAG ATGTTAACTC TTTATTCAAA GAGGCTATGA GCAAGGTTAA CAATGGTGAT 
TGTGAATCGG GGGTGCTCTT ATTACATGAG CTAGCCGATA GAAATCTACC CGGAGCATTA 
ATTAATTTGG GCTCTATATA CGAATCAGGC AAGTGCGGAA GTGAAGACCT AGCGAGAGCA 
AATGAATTAT TCAAAATAGC TTCTGAAATG AGTATCCCGA TAGGTCATTA CAGGTATGGT 
TTGTTGCACT TTGGAGATGA TTCGTATAAA CCTGATTACA AACTTGTTTT TAGAGAATGG 
TCAAAAGCTT TCAAGTTAGG TTTACCAATA TATAGTGAGC TTGCAATACT TCATCATGAG 
GGGCTTGGTA CTCATAAAAA TGCCCTGTTA GCTGAAATGT TGCTAATAAA AGGTGTTAAA 
CAAGGTGATG TACAAGCAAC CGAGCAACTT AAGGGCTTTT ATCTGGACAA ATCCAGTCCA 
CTCTACAATC CTGAAAAAGC AAAAAACTTT CGATAA 

 

Protein sequence

MYSNSIKSIA IVLLCLSSFF THADVNSLFK EAMSKVNNGD CESGVLLLHE LADRNLPGAL 
INLGSIYESG KCGSEDLARA NELFKIASEM SIPIGHYRYG LLHFGDDSYK PDYKLVFREW 
SKAFKLGLPI YSELAILHHE GLGTHKNALL AEMLLIKGVK QGDVQATEQL KGFYLDKSSP 
LYNPEKAKNF R