Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1108 |
Symbol | |
ID | 4017651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1271112 |
End bp | 1271810 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955100 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_562119 |
Protein GI | 91792468 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAA AGTTGTATTT ATTGCCAGGC ACCATGTGCA ACCACAGATT ATGGACAAGG CTTCAGCCTC ATTTGGACAG TGCGTTTGAG TTAATATACT TAGCGATTCC TCGAGACATG GATCTTGAGC AACTCGCCGC GCACTTCCAT GACATCATTG GCGAGGATAA AATATGCCTC ATCGGCTTTT CATTGGGCGG GTATATCGCC AGCTTGTTTG CCACCCGCTA CCCAGAGCGT ATTGCCAAGT TGTTTGTGAT AGCCAATAGC CCGACAGCTT TAGCGGTTGC CGAGCTTGAA CAGCGCAGTG CAATATTGAA GTTTGTGCAA TCTCATGGTT ATAAAGGCGC TAGCCGAAAA AAGATAGCAA ACTTGTTCGA TGACTCAATT CAGCAAGGGG AACTTATCGA TTTGGTGCAG CAGATGGATG CTGAGTTAGG TGAAGCCGAG TTTATCAGTC AGTATCAACA CACTTCCCAC AGGGTCGATG TTATTCAAGC CTTGAGTGGG CTTAACTTTC CCATTCATTT TTATTGCAGT GACCAAGACC CCTTGGTCGA TGTCGCGTGT TTGGATGAGT TAACGGCGCA AAGCCCACAG TTTTTAATGC ACAAAACATT GGGCACAGGT CATATGTTGC CACTAGAAAA ACCACAGCAG TTGGCCAAAC ACATACATGC CTGGGCAGCA CTTGATTAG
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Protein sequence | MKQKLYLLPG TMCNHRLWTR LQPHLDSAFE LIYLAIPRDM DLEQLAAHFH DIIGEDKICL IGFSLGGYIA SLFATRYPER IAKLFVIANS PTALAVAELE QRSAILKFVQ SHGYKGASRK KIANLFDDSI QQGELIDLVQ QMDAELGEAE FISQYQHTSH RVDVIQALSG LNFPIHFYCS DQDPLVDVAC LDELTAQSPQ FLMHKTLGTG HMLPLEKPQQ LAKHIHAWAA LD
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