Gene Sden_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1107 
Symbol 
ID4017650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1270505 
End bp1270993 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content47% 
IMG OID637955099 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_562118 
Protein GI91792467 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTAG TTCGAACATT TAACCAACAA GACTATCCTG ACGTTAAACG CATCTACCAG 
CAGGGGATAG ATACTGGCAA TGCAACCTTT CAGACAGTGG CCAAAGATTG GCTCGAGTGG 
GATAGTTCAA TGCTCAAGTG CTGTCGACTG GTTGCTGTTC AAGATAAACT CATTCTTGGC 
TGGGCCGCAT TATCCCCCAT TTCAAGCCGG CAAGTGTATT CTGGCGTGGC TGAAGTGAGC 
GTCTACCTTG CGAAGTCCGC CCAAGGCAAA GGCATAGGGC ATTTACTCTT GTCTAAGCTA 
ATTACAGATT CAGAATCCAA TCATATTTGG ACCTTGCAAG CGGGCATATT CCCTGAAAAT 
GAAGCTAGCA TTGAGCTACA CAAGAAAAAC GGCTTTCGAA TTATCGGTGT TCGAGAAAAA 
TTTGGCCAAA TGGGCCCCCT TTGGCGCGAT GTCGTCTTGA TGGAAAGACG CAGCAAACTG 
ATTGGGTGA
 
Protein sequence
MLVVRTFNQQ DYPDVKRIYQ QGIDTGNATF QTVAKDWLEW DSSMLKCCRL VAVQDKLILG 
WAALSPISSR QVYSGVAEVS VYLAKSAQGK GIGHLLLSKL ITDSESNHIW TLQAGIFPEN 
EASIELHKKN GFRIIGVREK FGQMGPLWRD VVLMERRSKL IG