| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1100 |
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| Symbol | |
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| ID | 4017643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1262288 |
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| End bp | 1263211 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955092 |
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| Product | LysR, substrate-binding |
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| Protein accession | YP_562111 |
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| Protein GI | 91792460 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCC AAGACTTAGC ACTTTTTGTG CGCACCGCCG ATTGCGGCAG CATTACCGCG
GCGGCCCAGG CCCTTGATAT GAGCACCGCC GCTGCCAGTG CGGCAGTAAA ACGTTTAGAG
AAGCAGCTCA ACAGTACCTT GTTTATTCGC TCCACTCGGC AATTACGATT AACCACAGAA
GGAGAGCACT TTCTGCTTCA CTGCCGCAAA GCACTGGACA CCTTGGCCGC TGGGCAAGCT
TCCATGGAGG CCTTGCAGGG ACGTATTGCT GGTGAGGTGC GTATTTCGGC GCCTTCAGAT
CTTGGCCGTA ATCTGTTACT GCCTTGGATA GATGACATCA TGGATGAACA CCCAGATCTA
AGATTGCACT TGATTATTGG TGACTCACTC GCCGACTTTT ATCATGACAG AATCGATCTC
GCCCTGCGCT ATGGTCGGCC TAATGACTCT TCCATGGTGG CTTTTAACAT CGCCAACGTG
GAGCGGATCA TCTGCGCCTC CCCCAGTTAC TTAAGCCGCT TTGGCATGCC GTTAACGCCT
GCCGATCTTG CCGATCACAA TTGCCTCTTG TATCACCTCA ATGATAGGCC ATTTGATCTC
TGGGAGTTTG AAACTAAATC GCCAACTGGG ACCACTGGGG AGCGGGAGCC AGAACAGTTT
AAAATTCGTG TAAAAAGTAA TCGTTGCTGT AATGATGGCG ATTTGGTGCA CCGCTGGGCC
TTGGCAGGCA AAGGGATTGC CAATAAGTCA CGTTTGGATG TGAACCATGA TTTAGCTGCG
GGGCGCTTGG TTAAATTATT GCCTGATTAC CATTCCCCTC AGAAAGAACT TAACCTCTTG
TGCCCCTCCC GCAGCCAAGT TACCCCTACT GTTTTGCTAT TAAGAGACAT GCTAAGGGAT
AAATTTAAGC AAATGCTCGG TTAA
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| Protein sequence | MNTQDLALFV RTADCGSITA AAQALDMSTA AASAAVKRLE KQLNSTLFIR STRQLRLTTE
GEHFLLHCRK ALDTLAAGQA SMEALQGRIA GEVRISAPSD LGRNLLLPWI DDIMDEHPDL
RLHLIIGDSL ADFYHDRIDL ALRYGRPNDS SMVAFNIANV ERIICASPSY LSRFGMPLTP
ADLADHNCLL YHLNDRPFDL WEFETKSPTG TTGEREPEQF KIRVKSNRCC NDGDLVHRWA
LAGKGIANKS RLDVNHDLAA GRLVKLLPDY HSPQKELNLL CPSRSQVTPT VLLLRDMLRD
KFKQMLG
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