Gene Sden_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1098 
Symbol 
ID4017381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1259339 
End bp1260256 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content51% 
IMG OID637955090 
Productalpha/beta hydrolase fold 
Protein accessionYP_562109 
Protein GI91792458 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GGATTTATGC CTGCGCCATA CTGCTCATGA GTGCGACAAG TTTTGTTCAT 
GCCGCCCAAG CCCCCCTGAA ATACCCTGTC GTTATGGTTC ACGGCATCTT TGGTTTCGAT
GATGTATGGG GTATCGATTA CTTCTACCGC ATACCACAAG CCTTGAAAGA TGAAGGTGCC
AAGGTGTTTG TTGCCTCAGT ATCACCGGCG AATTCCACCG AAGTACGCGG CGAACAACTT
AGAACGTACA TCCAAGCCGT GCTGGCCCAG ACAGGCGCGA CTAAAGTGAA CTTAATTGGC
CATAGCCACG GCGGACCGAC GGTGAGATAT GTTGCCAGTG TCAGCCCTGA AATGGTGGCT
TCTGTGACCT CTATCGGTGG CGTGAATTGG GGCAGCCGTT TTGCCGATGT GATGCGCGGC
TTAGTGCCAA TGGACTCCGC CACTGAATGG TTAGTAAAAC AAGGATTAGA TACCTTAGGT
CGGGTTATTT CTGGGGTTTC TGGCTCGCCA CAACGCCCTC AAGACAGCCT TGCCATGACA
CAGTCGCTGA CGACTCAAGG TTCAGTGCTA TTTAATAGTC GCTACCCTGA AGGCATGCCG
AGCCGATATT GTGGTCAAGG CCAAGCGCTT GCCAGCAACG GGGTGCGTTA CTTCTCTTGG
TCTGGCGCCT CGGCGTTCAC CAACGCCTTA GATCCTATCG ATTACGGCCT GGAACTCACC
AGCCTAGTGT TTAATGAACC CAATGACGGA TTAGTGTCTA GCTGTAGTTC ACATTTGGGA
CAAGTGATCA AAGACAATTA CACTATGAAT CACTTAGATG AAGTTAATCA TACTTTTGGG
ATCACCAGCT GGTTTGAAAC CAATCCCGTG ACCTTGTATC GCCAGCACAT GACGCGCTTG
CGCCAACTGG GGCTGTAA
 
Protein sequence
MKKWIYACAI LLMSATSFVH AAQAPLKYPV VMVHGIFGFD DVWGIDYFYR IPQALKDEGA 
KVFVASVSPA NSTEVRGEQL RTYIQAVLAQ TGATKVNLIG HSHGGPTVRY VASVSPEMVA
SVTSIGGVNW GSRFADVMRG LVPMDSATEW LVKQGLDTLG RVISGVSGSP QRPQDSLAMT
QSLTTQGSVL FNSRYPEGMP SRYCGQGQAL ASNGVRYFSW SGASAFTNAL DPIDYGLELT
SLVFNEPNDG LVSSCSSHLG QVIKDNYTMN HLDEVNHTFG ITSWFETNPV TLYRQHMTRL
RQLGL