Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1092 |
Symbol | |
ID | 4017375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1252906 |
End bp | 1253565 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955084 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_562103 |
Protein GI | 91792452 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.981456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAG ATGAAATGAA AAAAGCCGCC GGTTGGGCTG CACTTAAATA CGTTGAAGTA GACAGCATAG TTGGCGTTGG CACTGGCTCA ACGGTTAATC ATTTCATCGA TGCATTAGCC ACAATGAAGC ACAATATCAA GGGTGCGGTA TCGAGCTCCG TCGCTTCCAC TGAGAAAATG AAAGCCTTAG GCATTGATGT GTTTGACTTA AATGAAGTGT CTGAACTATC GATTTATGTG GATGGTGCCG ATGAAATCAA TGCCCATATG GACATGATCA AAGGCGGCGG CGCAGCCCTT ACCCGTGAAA AAATCGTCGC CGCAGTGGCC GATAAATTTA TTTGCATCGT GGACAATACC AAGCAAGTCG ACGTGTTAGG TCAGTTCCCC TTACCGGTTG AAGTCATTCC TATGGCGCGC TCTTATGTTG CTCGTGAGCT GGTAAAATTG GGCGGCGATC CCGTCTATCG TCAAGGGGTC ATCACAGACA ATGGCAATGT GATTTTAGAC GTATACAACC TTAAAATATT GAACCCTAAG GCGTTAGAAA CTCAAATCAA TGCCATCGTA GGCGTAGTCA CCAATGGTCT GTTCGCCAAT CGCGGCGCTG ATATACTGTT AATGGGTACC CCTGATGGCG TAAAGACATC AACAAACTAG
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Protein sequence | MTQDEMKKAA GWAALKYVEV DSIVGVGTGS TVNHFIDALA TMKHNIKGAV SSSVASTEKM KALGIDVFDL NEVSELSIYV DGADEINAHM DMIKGGGAAL TREKIVAAVA DKFICIVDNT KQVDVLGQFP LPVEVIPMAR SYVARELVKL GGDPVYRQGV ITDNGNVILD VYNLKILNPK ALETQINAIV GVVTNGLFAN RGADILLMGT PDGVKTSTN
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