| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1084 |
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| Symbol | |
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| ID | 4017367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1241359 |
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| End bp | 1242387 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955076 |
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| Product | erythrose 4-phosphate dehydrogenase |
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| Protein accession | YP_562095 |
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| Protein GI | 228950557 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000108376 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCG TTGCTATCAA TGGTTATGGC CGTATCGGCC GCTCAATTCT TCGTGCCCTG
TATGAGTCGG GAAAACGTCA GCAAATTCAA ATCGTTGCCA TTAATGAATT GGCGAAACCT
GAAGCTATCC GTCATTTAAC TCAATACGAT ACTACCCATG GCCGCTTCGG ACAGACGGTG
GAGTTGCAAG AAGGGAAGTT ACACATAGGT GATGATGCCA TCGCCTTATT CCATCAAAGT
GATGCCACTA AGCTGCCTTG GGGGGAGCTG GATATCGACA TAGTATTCGA GGCCAGTGGC
AGTCTAATTG AACGTGAAGC CTGCGAAGCC CACATTATTT CAGGTGCTAA GCAAGTGCTT
ATCAGCCATC CTTCGTCCCA AGATGTGGAT GCGACTATCG TTTACGGGGT CAATCATCAC
CTGTTAGCGG CAGAGCATAC CGTGGTGTCT AATGCTTCTT GCACCACCAA CTGCATAGTG
CCAGTGATCG ATGTGCTCGA CAGCCATTTT GGCGTAATAA GCGGTGCTAT CACCACCATA
CATTCGGCAA TGAACGATCA ACAAGTCATC GATGCTTATC ATGATGACTT GCGCCGTACC
CGCGCCGCTG GCCAGTCAAT TATTCCCGTG GATACTAAGC TTGCTCGTGG CATCGAGCGT
ATTTTACCTA AGATGAAAGA CAAGTTTGAA GCCATCTCAG TGCGGGTACC CACCATCAAT
GTAACCGCCA TAGATGTATC GGTAACTTTA CGTGATCGAG TCGACATTTC TATAATAAAC
AGCGTCTTGC AGCAGGCAGC GAAAGGGCGT TTCGATGGGA TTTTAGGTTA TACTGATGAG
CCATTAGTGT CTTGTGATTT TAATCACGAT CCACGCTCCA GCATAGTCGA TGCCACCCAG
ACTCGCGTCA GTGACGGCCA CTTGGTCAAG TTACTCTTGT GGTGCGATAA CGAATGGGGT
TTTGCCAACC GCATGCTCGA CACTAGCCTG GCGATGATTA GAGCAAAGAG CGCCAAGAGT
GTGAAGTAA
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| Protein sequence | MIRVAINGYG RIGRSILRAL YESGKRQQIQ IVAINELAKP EAIRHLTQYD TTHGRFGQTV
ELQEGKLHIG DDAIALFHQS DATKLPWGEL DIDIVFEASG SLIEREACEA HIISGAKQVL
ISHPSSQDVD ATIVYGVNHH LLAAEHTVVS NASCTTNCIV PVIDVLDSHF GVISGAITTI
HSAMNDQQVI DAYHDDLRRT RAAGQSIIPV DTKLARGIER ILPKMKDKFE AISVRVPTIN
VTAIDVSVTL RDRVDISIIN SVLQQAAKGR FDGILGYTDE PLVSCDFNHD PRSSIVDATQ
TRVSDGHLVK LLLWCDNEWG FANRMLDTSL AMIRAKSAKS VK
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