| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1071 |
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| Symbol | |
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| ID | 4016787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1224877 |
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| End bp | 1225653 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637955063 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_562082 |
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| Protein GI | 91792431 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCG TGATATTCAC ATTGTTACTC TTGCTGAGTT TTTTTTCGAT GGCAAAAGCC
CAAGAACCTC TAGTGTTTGT TACCAGTGAT TATCCTCCCT ATGTTATTGA TAATAATGGG
GTCGCAACCG GCATGGTGCC TGATATTATC AGGGCTATTT TTAAAGACTC GGACATCGAA
GTTGACATAG TATTCCAGCC TTGGAATCGT GGTCAGGCAT CAGTGATAAG TGGCGCTGCA
TTCGCGACCT TTCCCTATGT GATGACTAGG GAAAGGGCGA AAGTTTTTGA TTTTTCAGAT
CCTTTTTTGG CCTTTTTCCC TAAATTTTTT TACAACAAAA TGCGCTTCCC TAATGGCTTC
TCTTGGAAAA AATTAAAGGA TTTTCAAGGT TACAAGATGG GCGGGGTTAG GGGGTTTTGG
TATGAGGCCG ATTTTCAGGC CCTTCGACTT AACGTCAATT ATGTCAGCAC AGATTTACAA
AATATGAATA TGTTGCTCAA GGAGCGAGTC GACTTTACCT TGATTGATGA AATGGTGGGC
TGGCATCTTA TTAAGACAAA TTTCCCCCAT AAGAAAGACC ATTTTGCGGT TGCCAAAAAA
CCTGAAAGTC AAAGTGGGTT ACACTTGATG ATCTCTAGAA AGTATCCTAA CGCTAAAGTC
TTGACCCAAG TGTTTAATAA AGGGCTGAAA ACCATTAAAA CCAATGGGAC TTATCAAAAA
ATTCTCAATG ATTATCAGGT GTCTGAAGAA TACGCTCAGA TCCCCCAAGA CGAATAA
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| Protein sequence | MKSVIFTLLL LLSFFSMAKA QEPLVFVTSD YPPYVIDNNG VATGMVPDII RAIFKDSDIE
VDIVFQPWNR GQASVISGAA FATFPYVMTR ERAKVFDFSD PFLAFFPKFF YNKMRFPNGF
SWKKLKDFQG YKMGGVRGFW YEADFQALRL NVNYVSTDLQ NMNMLLKERV DFTLIDEMVG
WHLIKTNFPH KKDHFAVAKK PESQSGLHLM ISRKYPNAKV LTQVFNKGLK TIKTNGTYQK
ILNDYQVSEE YAQIPQDE
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