| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1066 |
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| Symbol | |
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| ID | 4016782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1217099 |
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| End bp | 1218718 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955058 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_562077 |
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| Protein GI | 91792426 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGC AATTAAGGGA TTGCTCCCTC ACCTTTGCCC ACAGGCCAGC CCTGTGGGTA
GAGGACAGAG AGTACAGCTA CCGCGAACTA TTTGCGCAAG CGGACCTTAT CGCTTGCCAA
ATACAAAAGT TAACAACCAC CGACGCTGTG TTGGTATTGT CGAAGAAATC CTTCAAAGGC
TATGCTGGCA TTCTCAGCTG TTTCTTGGCT GGGGTGACTT ATATCCCACT GAATGACAGC
TTCCCAACGG ATAAGTTAGT GGACATCATC CAGAGTAGCG GTTGCACAAC TTTACTTGCT
GATCCTGGCT GTGAAGAGAG TCTACTCAAA TTGCTACAAC AGTTACCCGA CCCCTTAACT
GTGCTGGTAA GCGGCAAAAC CAGCAATCTC AGCTATGCCC AAGGGGTTCA CACTCTGGCT
GACAACTTGG ATGATAATGA GACTGTGAAT GAATATGCGG CTAGCTATGC GAATGGTCAT
TTGCAAAGCA CTGGCAGCAC TAAACACTGT GCTAAGGCAG AGCCTGTATC AAACAGTCAT
TTGGCCTATT TAATGTTTAC CTCTGGCAGT ACCGGCAAGC CTAAGGGCGT GCCTGTATCG
ACGCAAAACC TACTGAGCTA CCTTGAGCAT ATTCGTAAGC TTTATGACTT TACGCCCTAT
GATAGGCACA GCCAATTCTT CGAATTTACC TTCGACTTAT CCATGCACGA TATCATGGTG
TGCTGGACAT CGGGTGGCTG TCTGTACGCG GCAGATGGTT TTGCTAAGCT TATGCCCTTG
CACTTTGCTA GCAAACACAA ATTAACTGTG TGGTTTTCTG TGCCCTCCCA AGTCAGTGCC
GCTCAGGCTG TGTTGAAAAA TAAATTTTTC AAACAACAAC TGCCAAATTT ACGCTACAGC
CTCTTCTGTG GTGAAGCCCT GCCAGCAAGC CTTACCCGGG ATTGGGCCAG TGTCGCCCCC
CACTCCAGCA TAGATAATCT CTATGGTCCC ACCGAAGCCA CCATAGCTTA TACCTGGTTA
CGGGTTGACC CTGACAAGCA TGGCGAATGC GGCATCATCC CTATAGGTAA GCCTTTTGGT
GACAATAAGG TCATGGTGCT CGATGAGCAG CAGCGCTTAG TCGCCAGCGG TGAAATTGGT
CAGCTGTATC TGTATGGGCC TCAAGTAGTA GCCGAGTATT GGCAAGATCC TGCGAACACT
CAAAAGAGCT TTCTCAATCT AGCCGTGGAT AATAACTCTC AGCAAGCACA CCTCTATTGT
ACTGGCGATC TTGTGAGTCA GTCGCCATCG GATGAGCTAG CGTTCCATGG CCGCGCCGAC
CAGCAAATCA AAATGCGTGG TTACCGGATT GAACTGCAGG AGATAGAAAA TAAAATTCGC
AGCCTAACCG GCAGTCAGCA GGTGGCGGTA TTAGCCCACC CCATTGGCAT CAATGGTGAA
GTTCTGGGGT TAGCCGCGTT TTACGATGCG CTTGGGTTTA ATGAGCATGA AATGATATTA
CTTTGCCGCA AGGTATTACC GGATTATATG ATACCGTCAA GGGGCTATTA TTTGGCAAAG
TTTCCACACA ATGCCAATGG CAAAGTCGAT AGGAAAGCAC TGCTTACACT GGCGGAATAA
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| Protein sequence | MIQQLRDCSL TFAHRPALWV EDREYSYREL FAQADLIACQ IQKLTTTDAV LVLSKKSFKG
YAGILSCFLA GVTYIPLNDS FPTDKLVDII QSSGCTTLLA DPGCEESLLK LLQQLPDPLT
VLVSGKTSNL SYAQGVHTLA DNLDDNETVN EYAASYANGH LQSTGSTKHC AKAEPVSNSH
LAYLMFTSGS TGKPKGVPVS TQNLLSYLEH IRKLYDFTPY DRHSQFFEFT FDLSMHDIMV
CWTSGGCLYA ADGFAKLMPL HFASKHKLTV WFSVPSQVSA AQAVLKNKFF KQQLPNLRYS
LFCGEALPAS LTRDWASVAP HSSIDNLYGP TEATIAYTWL RVDPDKHGEC GIIPIGKPFG
DNKVMVLDEQ QRLVASGEIG QLYLYGPQVV AEYWQDPANT QKSFLNLAVD NNSQQAHLYC
TGDLVSQSPS DELAFHGRAD QQIKMRGYRI ELQEIENKIR SLTGSQQVAV LAHPIGINGE
VLGLAAFYDA LGFNEHEMIL LCRKVLPDYM IPSRGYYLAK FPHNANGKVD RKALLTLAE
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