| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1057 |
|---|
| Symbol | |
|---|
| ID | 4017564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1209014 |
|---|
| End bp | 1209817 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637955049 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_562068 |
|---|
| Protein GI | 91792417 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCC AAGTTAATGA GTTGTTCTCT GAGTTGTGGC AAAACTATGT GTCGGTTACC
CCATCGGCAG CCAAAATTCA TGCCTTGCTA GGCTCGTCTC AGCAAGATGA TGTGCAAAAC
GATCATATTG CCCTGCGCAC CTTCAACATT GAGAAAATTA ACTTAGACAA GCTCGCCGCC
CACTTCTTGG CGCTGGGTTA CAAAGAAAAT GGTGAATACC ATTTCGAAGC TAAGAAACTC
TATGCCAAGC ATTATGAGCA TCCAGATCCA ACTCAGCCTA AGGTGTTTAT TTCTGAGTTG
TTATTGGAAA AATGCTCGCC TGAATTACAA GCCATAGTGC ACAAGTTGGT GGATCAAATC
GATGTTGCCG CCGTGACTGC TGACAATTTC CTTTACTCTG GGCGTCACTG GTCAATCGAT
CAAGCGACTT ACAACACCTT AGTGAAAGAA AGTGAATACG CCGCATGGGT TTCTGTGTGG
GGCTTTCGTG CCAACCACTT TACCGTGTCA GTGAATGCAC TGAAAAACTT TGAGACCTTA
GTCTCAGTGA ACGATACCTT GAAAGCGGCA GGTTTTGCAT TAAACACCTC AGGCGGTGAA
ATCAAAGGCA GCCAGGAAGT GATGCTGAAG CAATCATCAA CCTTAGCCGA TGAAGCCTTG
GTCGAATTCA CCGATGGCAG CAAGATGGTC CCAAGCTGTT TCTATGAATT TGCTCGCCGT
TTCCCAATGG CCGATGGCAC GCTGTACCCA GGTTTTGTGG CCGCCTCTGC CGACAAGATT
TTCGAAAGCA CTAACGCCCG TTAA
|
|---|
| Protein sequence | MHTQVNELFS ELWQNYVSVT PSAAKIHALL GSSQQDDVQN DHIALRTFNI EKINLDKLAA
HFLALGYKEN GEYHFEAKKL YAKHYEHPDP TQPKVFISEL LLEKCSPELQ AIVHKLVDQI
DVAAVTADNF LYSGRHWSID QATYNTLVKE SEYAAWVSVW GFRANHFTVS VNALKNFETL
VSVNDTLKAA GFALNTSGGE IKGSQEVMLK QSSTLADEAL VEFTDGSKMV PSCFYEFARR
FPMADGTLYP GFVAASADKI FESTNAR
|
|---|
| |