| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1056 |
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| Symbol | astD |
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| ID | 4017563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1207403 |
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| End bp | 1208899 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955048 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_562067 |
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| Protein GI | 91792416 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAC TTGAACAGTT AACCCCACTT ACGCAAACCC AGTTTATTGC CGGCCAATGG
CTTGCAGGTA AAGGGCCATC ATTCAGTTCA GTGAATCCTG CCAATGGCGA AGTGATCTGG
CAAGGCTTAG GCGCTGATGC GGGCCAAGTG GATGCGGCTA TTACTAGCGC AAGAGCGGCT
TTTTATACTT GGTCAGCCAT GAGCTTGACT GAGCGTTTGG TCATAGTTGA AGCTTTTGCC
GAGCAGCTTA AAGAGCACGC CGAGCTATTT GCGCGCACTA TCGCGTTAGA GACAGGTAAA
GCCCTGTGGG AAAGCCGCAC CGAAGTGGGC GCCATGACAG GTAAAATCGC CATTTCTATT
AAGGCAAATG CAGAGCGTAC CGGCACGGTT GAAAACCCTA TGCCAGGCGC CAAAGCCTTT
ATTCGTCATA AGCCTCACGG TGTGGTGGCG GTATTTGGCC CTTATAACTT CCCAGGCCAC
TTACCCAATG GTCATATAGT GCCTGCGCTT ATCGCCGGTA ATACTGTGCT GTTTAAGCCA
TCAGAGTTAA CACCCAAAGT GGCTGAGCTT ACTATGCAGT TATGGCAGCA AGCTGGGCTT
CCTAATGGCG TACTGAATTT GTTACAGGGC GAGATAGCGA CAGGTAAGGC ATTAGCTAGC
CACAAGGGCA TCGATGGTTT GTTCTTTACT GGTAGCTCCA ATACCGGTCA CCTGCTGCAT
CAGCAATATG CAGGACAACC AGGTAAAATT TTGGCCTTGG AGATGGGCGG TAATAACCCG
CTTATCATCA CCGAAGTGGC CAATGTCGAT GCCGCAGTGC ACGATATTAT TCAGTCGGCG
TTCATCAGTA GCGGCCAGCG ATGCACCTGC GCCAGACGAT TATTTATTCC CAAAACCGCT
AATGGCGATG CCATCTTGGC TAAATTGTTA ACCTCGACGG CTAAAATTGC CCTAGGCGAC
CCGTTTGCTG AGACCCAGCC TTTCTTTGGC GCCATGATAA GCGACAAAGC CGCTGCCGGT
ATGGTGAAGG CTCAGGCCGA TATCCAAGCC GCTGGTGGCG TGTCTCTGAT TGAGCTGACT
CAAGTGACGC CAGGCCTTGG CTTTGTGACC CCAGGTATTA TCGATGTGAC AGATGCAAGC
CCGCTTGCGG ATGAAGAGCA TTTTGGGCCG TTATTAAAAG TCTACCGTTA CACAGATTTT
GATGCCGCCA TCGATGAAGC CAATAACACC TCCTTTGGCT TATCGGCAGG ATTATTGGCC
GACAGCGAAA CAGACTACCA ACATTTCTAT CGCCGCATTC GTGCTGGCAT AGTCAATTGG
AACAAGCCGA TTACTGGCGC ATCAAGCGCC GCGCCATTTG GCGGTATTGG TGCCAGTGGT
AACCACAGAG CTAGCGCCTA TTATGCCGCT GACTATTGTG CCTACCCAGT GTCATCGGTA
GAAGCGCAGG CGGTAAGCTT GCCAGCCAGT TTAAGCCCAG GGCTTGTTAT AGAATAA
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| Protein sequence | MNQLEQLTPL TQTQFIAGQW LAGKGPSFSS VNPANGEVIW QGLGADAGQV DAAITSARAA
FYTWSAMSLT ERLVIVEAFA EQLKEHAELF ARTIALETGK ALWESRTEVG AMTGKIAISI
KANAERTGTV ENPMPGAKAF IRHKPHGVVA VFGPYNFPGH LPNGHIVPAL IAGNTVLFKP
SELTPKVAEL TMQLWQQAGL PNGVLNLLQG EIATGKALAS HKGIDGLFFT GSSNTGHLLH
QQYAGQPGKI LALEMGGNNP LIITEVANVD AAVHDIIQSA FISSGQRCTC ARRLFIPKTA
NGDAILAKLL TSTAKIALGD PFAETQPFFG AMISDKAAAG MVKAQADIQA AGGVSLIELT
QVTPGLGFVT PGIIDVTDAS PLADEEHFGP LLKVYRYTDF DAAIDEANNT SFGLSAGLLA
DSETDYQHFY RRIRAGIVNW NKPITGASSA APFGGIGASG NHRASAYYAA DYCAYPVSSV
EAQAVSLPAS LSPGLVIE
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