Gene Sden_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1046 
Symbol 
ID4017553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1196861 
End bp1197703 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID637955038 
Producthypothetical protein 
Protein accessionYP_562057 
Protein GI91792406 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAG AACATCAGGT CCTAGTTGGA TTACTCAAAA AACTCAAAGA AGATGCCTTG 
GTGCTTCCGA CCTTGCCTGA AGTGGCAATG CGAGTACAAG AAGTGGTCGC TCGTCCTGAG
ACTAGCCTCA AACAGGTGGG TGATATCATA GGTCAAGATG CGGCCATTTC AGCCCGTATT
GTCAAAGTGG CCAACAGTGT GATGTATTGC CGTGGTCCTA AAGCCGAAAA TATTCGCGCA
GCGGTGAATC GCATCGGTCT GGTTAAAATT AAAACCATCG CCACTTCGGT TGCCATGGAG
CAGTTGTTTA TTTCAAGTAA TGAGATGGTT TGGGAAGTCA TGGATGAGGT GTGGCACACC
TCCATTGAGG TGACCGCGGC AGCAGGCTCA ATACTGTTGA TGTACAACAG ACGCAACCCA
TCGAAAGCGT TAGACAGGGA AACCCTGACA CTTGCAGGCC TAGTCCACAA TATTGGGGCT
TTACCTGTAC TCACTGAAGC TGAATCTCAG CCCGAGCTGT TTACCAGCAT AGATCAATTG
CGTTTATTGG TGAGAAAGAT GCAAGGGCCA ATCGGCCGCG CCGTGTTGAA AAGTTGGGAC
TTCGCTCCAG AAGTGATGGA AGTGGTCGAG CGTTGGAGTG ATTTAAGTTA TTTACCCGAA
ACAGTAAACT ACGTCGATTT TATCCGCGCC GCCGCGTTTT ATACTGGCGA GCTTCGTGCG
GGAGATGAAT TACAGCAGCG TCTAGGGGTG TTTGCCGAGC GAGGCTTACC TGTGACCCCT
GAAGATTTAG CCAGCGATGA ATTTATAGAT ACCTTTCACT CCATCAAACA AAGTTACCAC
TAG
 
Protein sequence
MTAEHQVLVG LLKKLKEDAL VLPTLPEVAM RVQEVVARPE TSLKQVGDII GQDAAISARI 
VKVANSVMYC RGPKAENIRA AVNRIGLVKI KTIATSVAME QLFISSNEMV WEVMDEVWHT
SIEVTAAAGS ILLMYNRRNP SKALDRETLT LAGLVHNIGA LPVLTEAESQ PELFTSIDQL
RLLVRKMQGP IGRAVLKSWD FAPEVMEVVE RWSDLSYLPE TVNYVDFIRA AAFYTGELRA
GDELQQRLGV FAERGLPVTP EDLASDEFID TFHSIKQSYH