Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1040 |
Symbol | |
ID | 4017085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1192225 |
End bp | 1192770 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955032 |
Product | hypothetical protein |
Protein accession | YP_562051 |
Protein GI | 91792400 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3154] Putative lipid carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGTG CTGTGAAGCA TCAATTGGCT CAAACCATCT TAAACCAAGC CCCAAAACTT AGCCGTCATT CCCTGGCACT CGTGCCGCAG AAATATAAAC ATGAGGCCAT AAGAAAAGTG CTCGAGTTAG GGCTAAAGCA TTCGCTACAG CAAGGTGAGT TGGATTTTTT GACTGATAAA TGGGTCAACA TTGAGGTGCT GGATATTGGG CTCAGTTTTG AGTTAAGCAT CAAGCTTGAG TTAATCCCTG GGCAAGATGT TGACACTAGA GTCTTACAAC TGCGATCACC TAGGCAAGCG GATGTGAGCT TTAGTGCCAA TGTGCCTGAA TTACTCTTAA TTGCTTCGGG CAAGGAAGAC CCGGACAGCT TGTTTTTCCA GCGAAAACTC TTGATAGAAG GGGATACCGA GCTTGGGCTT GAGGTAAAAA ACTTACTGCT TGCCATAGAG CTTGATGCAT TGCCAAAGGT TATCCGTGTC AGTATTGAAA AGTGCTCTCA AGGGCTTGAA ATGCTGCAAT CACACAGCCA AGTGGCCGCG TCATGA
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Protein sequence | MLSAVKHQLA QTILNQAPKL SRHSLALVPQ KYKHEAIRKV LELGLKHSLQ QGELDFLTDK WVNIEVLDIG LSFELSIKLE LIPGQDVDTR VLQLRSPRQA DVSFSANVPE LLLIASGKED PDSLFFQRKL LIEGDTELGL EVKNLLLAIE LDALPKVIRV SIEKCSQGLE MLQSHSQVAA S
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