| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1039 |
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| Symbol | |
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| ID | 4017084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1191076 |
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| End bp | 1192077 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637955031 |
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| Product | peptidase U32 |
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| Protein accession | YP_562050 |
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| Protein GI | 91792399 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCC TCTGCCCGGC CGGTAACCTT GCCGCCCTAA AAGCCGCCTT CAATGCTGGC
GCCGATGCCG TCTACCTAGG CCTTAAAGAT GATACGAATG CCCGCTCCTT CGCTGGACTT
AACTTCACCC CAGAACAAAT TAAGCACGCC ACGCAGCTTG CTCATCGACA AGGCCGTCAC
GTGTTCTTAA CCATCAATAC CTTCCCCAAA CCCGGTGAAG AGTGGCGCTG GTATGACGCC
ATCGACTTAG CCGCCAGGCT TGAGATGGAC GCGCTAATTG TCGCAGACCT CTCTCTACTC
AGTTATGCCC ATGAGCACTA CCCTCAATTA GCCCTTCATT TATCAGTACA AGCAAGTGCC
ACCAACTTAG GTGCGCTGTC ATTCTATAAA AACGCTTTTA ATATCCAGCG CGCCGTGCTG
CCAAGGGTAT TGTCCATGAA GCAAGTGCGT GATTTATCCA AAGTCAGCCC GGTAGATTTA
GAAGTATTTG CCTTTGGCAG TTTATGCATC ATGGCCGAAG GGCGCTGTCA CTTATCCTCT
TATGTGACCG GTCAGTCCCC CAATACCGGC GGCTCTTGCT CACCCGCTAA GCATGTGCGC
TGGCAAGATG AAGGTAAGCA CAGGATGACT CGCCTCAATG AAGTCTTGAT AGACAAGGCC
GATGAAACCG AGCAACTGGG CTACCCTGTG GTCTGCAAGG GCCGCTATGT GGCAGAAGAA
GAGTCTGAGG CAAAATACTT ACTGGAATCC CCCACCAGCT TAAACACGTT AAGCCTATTG
CCAGAACTTG CTGCAAGTGG CATTAAGTCA CTCAAAATTG AAGGCCGTCA GCGCAGCCCA
GCCTATGTGG AACAAGTCAC CCGGGTTTGG CGCAGCGCCA TCGACACTTA CTTTGCCAAC
CCAAGCGCCT ACCATGAAAC CCAAGAGTGG CAGCGAGTGC TTGGCAAAGT ATCCGAAGGG
CAAACCACCA CCTTGGGCGC TTATGAACGT CAATGGCAAT AA
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| Protein sequence | MELLCPAGNL AALKAAFNAG ADAVYLGLKD DTNARSFAGL NFTPEQIKHA TQLAHRQGRH
VFLTINTFPK PGEEWRWYDA IDLAARLEMD ALIVADLSLL SYAHEHYPQL ALHLSVQASA
TNLGALSFYK NAFNIQRAVL PRVLSMKQVR DLSKVSPVDL EVFAFGSLCI MAEGRCHLSS
YVTGQSPNTG GSCSPAKHVR WQDEGKHRMT RLNEVLIDKA DETEQLGYPV VCKGRYVAEE
ESEAKYLLES PTSLNTLSLL PELAASGIKS LKIEGRQRSP AYVEQVTRVW RSAIDTYFAN
PSAYHETQEW QRVLGKVSEG QTTTLGAYER QWQ
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