| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1035 |
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| Symbol | |
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| ID | 4017080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1186261 |
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| End bp | 1187637 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955027 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_562046 |
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| Protein GI | 91792395 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAA ATAAGACGGC CTATGTGTGT AATGAATGTG GCCAAGATTT CCCTCGCTGG
CAAGGGCAGT GCAACACTTG CCAAGCTTGG AACTGTATTA CCGAAGTGCG TTTAGGCACA
GGCACAAGTG CAACCCGTAC CCATCAGTTT GCCGGTTACG CAGGTGCGGC GGGGAGTGGG
ACTGCCAAAG TGCAGACCCT AGATAAAATT GATTTAAATG CACAACCACG AATAGCCAGC
TCCTTTGCCG AACTGGATAG AGTGCTAGGC GGCGGGATAG TGCCTGGCAG CGCCATTTTG
ATTGGCGGCC ATCCTGGGGC GGGTAAAAGT ACCTTATTGC TGCAAACCTT GTGTCAACTG
GCTCAAGTGA TGCCTGCGCT TTATGTCACT GGAGAAGAGT CGTTGCAACA AGTCGCAATG
CGGGCTCACA GGTTAGGATT GCCTACGGCA AATTTGAACA TGCTATCTGA GACCAGTGTT
GAGGCTATTT GCGATATCGC CCTGCAAGAA AAGCCCAAAG TTATAGTGAT AGACTCCATT
CAAGTGATGC ACATGAGCGA TGTGCAATCT TCCCCTGGCA GTGTGTCTCA GGTGCGTGAG
TCGGCTTCTT ATTTAACCCG TTTTGCGAAA CAGCAAGGCA TAGCCATCAT CATGGTGGGC
CATGTGACCA AAGACGGTAG CCTAGCTGGC CCTAAAGTGT TGGAACACTG CATAGACTGC
TCTGTGATGT TTGAAGGGGA TAGTGATAGC CGTTATCGCA CGTTGCGCTC CCATAAAAAC
CGTTTTGGCG CCATCAATGA GCTTGGGGTG TTTGCCATGA CGGAGCGAGG CCTTAAAGAA
GTGGCCAATC CATCGGCGAT TTTTCTGTCT CGCGGCGAAG AGGCGGCCTC GGGTTCTTTA
GTCATGGTGG TATGGGAAGG CACCCGGCCC TTGCTGGTGG AATTACAGGT TTTAGTAGAC
AGCTCGGCCA TGGCGAACCC AAGGCGAGTG GCTGTGGGTA TGGATGCTAA TCGCCTCGCC
ATGTTACTGG CTGTGATGCA CAGACACGGC GGGCTACAGA TGTCCGATCA AGATGTGTTC
GTTAACGTGG TCGGCGGGGT TAAGGTCTCT GAGACGAGCG CCGACTTAAC CTTATTGCTG
GCCATGGTAT CAAGTTTTCG TGGTGAGATT TTACCCCGTG ATTTAGTGGT GTTTGGTGAG
GTGGGCTTAT CTGGCGAAAT ACGGCCAGTG CCTAATGGAC AAGAAAGACT CATTGAAGCG
GCTAAACACG GGTTTACCCG CGCCATAGTC CCTAAAGCCA ATGTCCCTAA GAAGTCACCG
CCTGGCATGC AGGTCATTGG AGTGAGTAAA TTATCCCAAG CCTTAGAAGT GCTTTAA
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| Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCNTCQAW NCITEVRLGT GTSATRTHQF AGYAGAAGSG
TAKVQTLDKI DLNAQPRIAS SFAELDRVLG GGIVPGSAIL IGGHPGAGKS TLLLQTLCQL
AQVMPALYVT GEESLQQVAM RAHRLGLPTA NLNMLSETSV EAICDIALQE KPKVIVIDSI
QVMHMSDVQS SPGSVSQVRE SASYLTRFAK QQGIAIIMVG HVTKDGSLAG PKVLEHCIDC
SVMFEGDSDS RYRTLRSHKN RFGAINELGV FAMTERGLKE VANPSAIFLS RGEEAASGSL
VMVVWEGTRP LLVELQVLVD SSAMANPRRV AVGMDANRLA MLLAVMHRHG GLQMSDQDVF
VNVVGGVKVS ETSADLTLLL AMVSSFRGEI LPRDLVVFGE VGLSGEIRPV PNGQERLIEA
AKHGFTRAIV PKANVPKKSP PGMQVIGVSK LSQALEVL
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