| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1025 |
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| Symbol | |
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| ID | 4017070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1172874 |
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| End bp | 1173650 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955017 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_562036 |
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| Protein GI | 91792385 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0327864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTG ATTTAAAAAA AGCAGCCCAA CTTGGCATTC AGTTAATGGA CTTAACGACG
TTAAATGATG ATGACACAGA TCAAAAGGTC ATCGATTTAT GCCACAAGGC CGTCACCGCT
GCGGGACACA CTGCCGCTAT TTGTATCTAC CCTCGTTTTA TCCCTATTGC GCGCAAGACC
CTAAACGAGC TTGACGCCGA AGACATCAAG ATTGCGACTG TGACTAACTT CCCTCATGGC
AATGACGATA TTGCTATTGC CGTGTTAGAG ACTCGTGCTG CCGTTGCCTA TGGCGCCGAT
GAAGTTGATG TGGTGTTTCC TTATCGCGCC TTGATGGATG GTGATGAAAC CACAGGTTTT
GAGCTAGTCA AAGCTTGTAA AGAAGCCTGT GGCGATGAAG CCATATTAAA AGTGATTATC
GAATCTGGCG AGCTTAAAAA TCCTGCGCTT ATTCGCAAGG CTTCTGAACT TGCCATCGAT
GCTGGCGCCG ATTTTATCAA GACTTCTACC GGTAAAGTGC CAGTAAACGC GACCTTAGAA
GCCGCTGAAA TCATGCTGAC TGTCATCAAA GAGAAAAACA CTAAGGTTGG TTTTAAGCCT
GCTGGCGGCG TACGTGATGC GGCGCAAACG GCTGAGTTCT TAGCCCTTGC CGAACGTATT
TTAGGCGCCG ATTGGGCGAC ACCAAGCACC TTCCGTTTTG GCGCTTCGAG CTTACTTAAC
AGCCTATTGC ATACCTTAGA ATTAGCAGAA GCTGCCAAAC CAAACCAAGG TTACTAA
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| Protein sequence | MMSDLKKAAQ LGIQLMDLTT LNDDDTDQKV IDLCHKAVTA AGHTAAICIY PRFIPIARKT
LNELDAEDIK IATVTNFPHG NDDIAIAVLE TRAAVAYGAD EVDVVFPYRA LMDGDETTGF
ELVKACKEAC GDEAILKVII ESGELKNPAL IRKASELAID AGADFIKTST GKVPVNATLE
AAEIMLTVIK EKNTKVGFKP AGGVRDAAQT AEFLALAERI LGADWATPST FRFGASSLLN
SLLHTLELAE AAKPNQGY
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