| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1022 |
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| Symbol | |
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| ID | 4017067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1169080 |
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| End bp | 1169847 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955014 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_562033 |
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| Protein GI | 91792382 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000454975 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACT CCCATGCTCA TCTTGATTTT GATGATTTTG ACCACGACAG AACGCAGTTG
TTTGCCGATA TGAAGCGACA AGGCATCAGC TCGGCCATTT TACCTGGGGT CTCATCCCGT
CATTGGTCTA AACAGTTAAC AATCGCGGCG CAATATGACT GTTATTATGC CCTTGGGATC
CATCCCTGGT TTTGTCCTGA TAATATCGAA ACCGAAGTTG CGGCGTTGGC TCAATTAATC
GAGCTTAATC GTAAAGACAA TAAATTAGTG GCTGTAGGGG AGTGTGGTTT AGACAAACGC
CATAAGCAAA GGGCTTTCTC TACTCAAGTC GCCTTACTTG AGCGGCAGTT ACAGCTGGCG
ATAAGCCATC AATTACCGGT TATTTTGCAT TCGGTTCGGG CTCATAATGA GTTACTGGGC
TTACTTAAGT GCTATCCCAA TCCTAAGGGC GGGGTTATTC ATGGTTTCTA TGGCGGCCCT
GAGTTGGCTA AGGCTTATAT CGCCCTAGGT TATAAATTAG GTGTAGGCGG GCTCATCATG
GACCCCAAGG CGAAGAAATT ACGAGAAACA GTCGCTCAAT TAGCGCCTGA TTCTTTCCTC
ATAGAGACAG ATTCACCGAA TATGACCCCC ATCAATGCAG TGAATTCGCG AAATTCTCCC
TTAAATATCC CCAGTTTTGT GGCCGAAATC GCGTTTTTAC AGAATAAATC AACTGTCTCT
ATATTAGAAC AGCTTGATGA AAATGTGGCG CAACTATTTG AGCTTTAG
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| Protein sequence | MIDSHAHLDF DDFDHDRTQL FADMKRQGIS SAILPGVSSR HWSKQLTIAA QYDCYYALGI
HPWFCPDNIE TEVAALAQLI ELNRKDNKLV AVGECGLDKR HKQRAFSTQV ALLERQLQLA
ISHQLPVILH SVRAHNELLG LLKCYPNPKG GVIHGFYGGP ELAKAYIALG YKLGVGGLIM
DPKAKKLRET VAQLAPDSFL IETDSPNMTP INAVNSRNSP LNIPSFVAEI AFLQNKSTVS
ILEQLDENVA QLFEL
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