| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1010 |
|---|
| Symbol | rpsO |
|---|
| ID | 4016578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1150872 |
|---|
| End bp | 1151141 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637955002 |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | YP_562021 |
|---|
| Protein GI | 91792370 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.876313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTAA GTACTGAAGC AAAAGCAAAA ATCCTAGCTG ATTTCGGCCG TTGTGAAAAC
GATTCAGGTT CAACTGAAGT TCAGGTAGCT TTGTTAACAG CTCAGATCAA CCACCTTCAA
GGTCACTTCA AAACGCACAT CCACGATCAC CACTCACGTC GTGGTTTGTT ACGTATGGTT
AGTGCGCGTC GTAAGCTTAC TGCTTACCTT AAGCGTACTG ACAATGCACG TTACACTGCG
TTGATCCAGA AGTTAGGTTT ACGTCGTTAA
|
|---|
| Protein sequence | MSLSTEAKAK ILADFGRCEN DSGSTEVQVA LLTAQINHLQ GHFKTHIHDH HSRRGLLRMV
SARRKLTAYL KRTDNARYTA LIQKLGLRR
|
|---|
| |