| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1007 |
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| Symbol | infB |
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| ID | 4016574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1146603 |
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| End bp | 1149257 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954999 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_562018 |
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| Protein GI | 91792367 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.605303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA CAAGCGTACA AAAATTAGCC GCGGAAGTGG GTAAAAGTGT TGAGCGACTG
ATTGAGCAGT TTTCTGAAGC AGGCCTTAAA AAAGGTCAAG CTGATACAGT ATCAGAAACT
GAGAAACAAC AGTTACTCGA TTACCTAAAG AAGCAGCACG GTGCTGATAA AGCGCCAACA
AAAATGACAT TACAACGTAA AACAGTGTCG ACCTTAAGCG TGCCCGCCGG TGGTGGTCAG
TCAAAAGACG TTAAAGTTGA AGTGCGTAAA AAGCGTACCT TCGTTAAGCG CGATGACAGC
GAGTTAGTCG ACCAAGCGGA ACTTGAAGCT AAGGCTAAAG CCGAAGCAGA CGCAAAAGCG
GCTGCAGAAG CTAAGCAAAA AGCTGACGCC GAAGCACAAG CTAAAGCGGC GGCAGAAGCC
AAAGCAAAAG CTGAAGCTAA CAAAGCCAAG GAAAAAGCGC CACAGGCGCC AGCACCTAAG
CCAAAAGCTG AACTGAAAGC TGAAACGCCA GAAGCTGCTG CAGCGCGCGC TGAAGCGGAG
CGCATCAAAG CGACTCAAGA AGCTGTGCTA ACTAAAAAGC AAAAAGAGGA AGCGGCACAA
GCTGCTGAAG AAGCTAAGAA ATTAGCTGAA GTCAACTCTA AGCGCTGGGC AGAAGAAGAG
CGTTTACGCC TTGAAGCTGA AAAGAATGGC GATCACCATG TCACTACCTC TAAAGTGGCT
CGCGCCGCTG AAGACAGTTC AGATATGGAT GATGAAAAGC GTGGACGTCG TGCCCGTAAC
AAGCCGACCA ACAAGAAGCG TGGCGGTAAA GATGCCCGTG ACGGTCGTGA AAAGCACATG
CGTAACCGCA GCACTGCACC TCAGTCTATG GCGCACGGCT TTAACAAGCC AGTGGCAGCC
GTAAGCCGTG ATGTTCGCAT CGGTGAAACC GTTTCTGTAG CTGAATTGGC TCATTTAATG
GCCGTTAAAG CCACTGAAAT CATCAAGCAG ATGATGAAGA TGGGTTCAAT GGTGACCATT
AACCAAATTC TTGATCAAGA AACTGCGCAA ATGGTTGCAG AAGAGATGGG TCACAAGGTT
GTTTTACTTC GTGAAAACGA ACTAGAAGAG CAAGTGCTTG GCGATCGTGA TGACAACGTT
AAGTTAGAAA CACGTGCGCC AGTTGTGACT ATCATGGGTC ACGTCGACCA CGGTAAAACA
TCATTACTTG ATTATATCCG TCGTGCAAAA GTTGCTGCTG GTGAAGCCGG TGGTATTACT
CAGCATATCG GTGCATACCA TGTTGAAACA GACAATGGCA TGATCACCTT CTTAGATACA
CCGGGTCACG CCGCGTTTAC TTCTATGCGT GCTCGTGGTG CTAAGGCGAC CGATATTGTT
ATTTTGGTTG TTGCTGCAGA TGATGGCGTA ATGCCACAGA CTATCGAAGC AATCCAACAC
GCTAAAGCCG GTAATGTGCC GTTAATCGTC GCGGTTAACA AAATGGATAA GCCTGATGCT
GATCCAGAGC GTGTTAAGAG CGAATTGTCT CAGCATGGCG TAATGTCAGA TGATTGGGGC
GGCGACAACA TGTTCGTTCA CCTATCAGCT AAGACGGGTG AAGGCGTAGA TGAACTATTA
GAAGGCATTT TATTGCAGTC TGAAGTTCTT GAACTTAAAG CGGTTCGTGA AGGCATGGCA
GCAGGTGTGG TTATTGAATC ACAACTTGAT AAAGGCCGTG GTCCAGTCGC AACTGTATTG
GTTCAGTCTG GTACCTTGCG TCAAGGTGAT ATCGTTCTTT GTGGCTTAAT GTACGGTAAA
ATCCGTGCAA TGAAAGACGA AAACGGTAAT GCAATCACAG AAGCGGGTCC TTCTATCCCT
GTTGAGATCT TAGGTCTTTC TGGCGTGCCA TCGGCAGGTG ATGAAGCGAC TGTAGTACGT
GATGAGCGTA AAGCGCGTGA AGTTGCACTT TATCGTCAAG GCAAGTTCCG TGATGTTAAA
CTTGCTCGTC AGCAGAAGTC TAAGCTTGAA AACATGTTTG CCAACATGGA AGAAGGTGAA
GTTCAAGAAC TTAATATCGT GCTTAAAGCA GACGTTCAAG GTTCATTGGA AGCAATTTGT
GATTCGTTAA CGGGTCTATC TACTGCTGAA GTGAAAGTGA ACATCATAGC GCGCGGTGTA
GGTGCATTGA CTGAAACTGA TGCAACATTG GCAGCAGCCT CTAACGCTAT CATGGTTGGC
TTTAATGTTC GTGCCGATGC ACAAGCGCGT AAGACTATCG AAGCTGAAAG TGTTGATCTA
CGTTACTACA GCATCATCTA TAATCTAATT GATGAAGTTC GTGCTGCAAT GACGGGCATG
TTAGCTCCTG AATTTAAGCA ACAGATTATC GGTCTGGCTG AAGTTCGTGA CGTGTTTAAG
TCTCCTAAGA TCGGCGCAAT CGCGGGTTGT ATGGTGACTG AAGGTATCGT TAAGCGCAGC
GCGCCAATCC GTGTTCTACG TGACAACGTG GTTATCTATG AAGGTGAGCT TGAGTCATTA
CGCCGCTTCA AAGATGATGC TACTGAAGTC CGTAACGGCA TGGAATGTGG TATCGGTGTG
AAGAACTACA ATGACGTTCG CGTAGGCGAC CAGATTGAAG TCTTCGAAAC CATTGAAGTC
GCACGCACCT TATAA
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| Protein sequence | MADTSVQKLA AEVGKSVERL IEQFSEAGLK KGQADTVSET EKQQLLDYLK KQHGADKAPT
KMTLQRKTVS TLSVPAGGGQ SKDVKVEVRK KRTFVKRDDS ELVDQAELEA KAKAEADAKA
AAEAKQKADA EAQAKAAAEA KAKAEANKAK EKAPQAPAPK PKAELKAETP EAAAARAEAE
RIKATQEAVL TKKQKEEAAQ AAEEAKKLAE VNSKRWAEEE RLRLEAEKNG DHHVTTSKVA
RAAEDSSDMD DEKRGRRARN KPTNKKRGGK DARDGREKHM RNRSTAPQSM AHGFNKPVAA
VSRDVRIGET VSVAELAHLM AVKATEIIKQ MMKMGSMVTI NQILDQETAQ MVAEEMGHKV
VLLRENELEE QVLGDRDDNV KLETRAPVVT IMGHVDHGKT SLLDYIRRAK VAAGEAGGIT
QHIGAYHVET DNGMITFLDT PGHAAFTSMR ARGAKATDIV ILVVAADDGV MPQTIEAIQH
AKAGNVPLIV AVNKMDKPDA DPERVKSELS QHGVMSDDWG GDNMFVHLSA KTGEGVDELL
EGILLQSEVL ELKAVREGMA AGVVIESQLD KGRGPVATVL VQSGTLRQGD IVLCGLMYGK
IRAMKDENGN AITEAGPSIP VEILGLSGVP SAGDEATVVR DERKAREVAL YRQGKFRDVK
LARQQKSKLE NMFANMEEGE VQELNIVLKA DVQGSLEAIC DSLTGLSTAE VKVNIIARGV
GALTETDATL AAASNAIMVG FNVRADAQAR KTIEAESVDL RYYSIIYNLI DEVRAAMTGM
LAPEFKQQII GLAEVRDVFK SPKIGAIAGC MVTEGIVKRS APIRVLRDNV VIYEGELESL
RRFKDDATEV RNGMECGIGV KNYNDVRVGD QIEVFETIEV ARTL
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