| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1000 |
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| Symbol | |
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| ID | 4017597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1138527 |
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| End bp | 1140497 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954990 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_562011 |
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| Protein GI | 91792360 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000544697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGACA TGGCAAAAAA TTTAATTCTC TGGGTCGTCA TCGCCGTAGT GTTGATGTCG
GTATTTCAGG GTTATTCCCC CTCTTCTTCG AATTCGCAGA AGATGGATTA TTCCACCTTT
TTGGACAGTG TTCGTGGTGG CCAAATTAAC ACGGTTGAAA TCAAAAGCGA TCAGCGAACT
ATCGAAGGCA CTAAGCGTAC CGGTGAGAAA TTCGTCACCA TCATGCCTAT GTATGACCAA
GACTTGATCA ACGACCTTGA CCGTAAAGGC ATTACAATGA AAGGCCAAGA AGCGGAAGAA
TCAAGCTTCT TGACTCAAAT CTTTATTTCT TGGTTCCCTA TGTTACTGCT TATCGGGGTG
TGGATATTCT TCATGCGCCA GATGCAAGGT GGTGGCGGTA AGGGCGCAAT GTCATTTGGC
AAGAGTAAAG CCAAATTGAT GAGTGAAGAT CAAATCAAAA CCACCTTTGC CGATGTGGCA
GGTTGTGATG AAGCCAAAGA AGAAGTTAAA GAATTAGTGG ATTACCTGCG TGACCCCACT
AAATTCCAGA AACTGGGCGG CCGCATACCC ACAGGCGTCT TGATGGTAGG GCAACCCGGT
ACAGGTAAAA CCTTACTGGC CAAAGCCATT GCCGGTGAAT CTAAGGTACC ATTCTTTACT
ATTTCAGGTT CTGACTTCGT GGAAATGTTT GTCGGTGTCG GTGCATCTCG TGTGCGTGAC
ATGTTCGAGC AAGCGAAAAA ATCAGCGCCT TGTATCATCT TTATCGATGA AATCGATGCC
GTAGGTCGTC AGCGTGGTGC AGGTGTCGGT GGTGGTCATG ATGAAAGGGA ACAAACTCTT
AACCAAATGC TGGTCGAGAT GGATGGTTTT GAAGGCAACG AAGGCGTTAT CGTCATCGCG
GCAACTAACC GCCCAGACGT ATTAGACTCG GCGTTATTGC GTCCAGGCCG TTTCGACCGT
CAAGTCGTGG TTGGCTTACC GGATGTACGC GGTCGTGAGC AGATTTTGAA AGTGCATATG
CGTAAAGTGC CTTTGTCTGA TGATGTTAAA GCCAGCGTTA TTGCTCGTGG CACACCCGGA
TTCTCTGGTG CAGACCTTGC TAACCTAGTG AACGAAGCTG CCTTGTTTGC TGCCCGTGGT
AATCGCCGTG TCGTCAGCAT GGAAGAGTTT GAGCGTGCTA AAGATAAAAT CATGATGGGC
GCAGAGCGCC GTTCTATGGT GATGTCGGAA GCGGAAAAAG AAATGACCGC TTATCATGAA
GCCGGTCATG CCATTGTAGG TTGTCTAGTC CCCGAGCACG ACCCTGTGCA CAAGGTCACT
ATCATTCCTC GTGGCCGCGC CTTAGGTGTG ACTTTCTTCT TACCTGTGGC TGATGCCATT
AGTCAGAGCC GCCTAAAGCT TGAGTCGCAA ATTTCGGTAG CCTATGGTGG CCGTCTTGCT
GAAGAGTTAA TTTACGGCAG TGATAAAGTG TCGACCGGTG CATCACAAGA CATCAAATAC
GCGACGTCTA TTGCGCGCAA CATGGTGACT CAGTGGGGCT TCTCGGACAA GTTAGGTCCA
CTGCTTTATG CTGAAGAAGA TAATGAAGTT TTCTTAGGTC GTAGCATGGG TAAATCTAAA
GCTATGTCTG ATGACACTGC TAGGATCATA GATGCTGAAA TCAAAGCCTT TATCGATAAG
AATTATGCTA GAGCACAAAG TTTGCTCAAC GATAACATGG ATATCTTACA CTCGATGAAA
GATGCGTTAA TGAAGTATGA GACGATAGAT TCATTGCAGA TCGATGATTT AATGAATCGC
CGTGAAGTTC GTCTTCCTGC CGAATGGCAA AAAGATGAGA CCTCAGATGA TGATGGCAAT
ACGCCAAAAG CTGGTGCTGA CGAGAAAGCT GACGTTAGCC CAGAAAAATC TGACTCAGAT
ACGGAAATTG AGCCAAAAGT CGATGATGCC GATGGTACGC CTGCTAAGTA G
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| Protein sequence | MSDMAKNLIL WVVIAVVLMS VFQGYSPSSS NSQKMDYSTF LDSVRGGQIN TVEIKSDQRT
IEGTKRTGEK FVTIMPMYDQ DLINDLDRKG ITMKGQEAEE SSFLTQIFIS WFPMLLLIGV
WIFFMRQMQG GGGKGAMSFG KSKAKLMSED QIKTTFADVA GCDEAKEEVK ELVDYLRDPT
KFQKLGGRIP TGVLMVGQPG TGKTLLAKAI AGESKVPFFT ISGSDFVEMF VGVGASRVRD
MFEQAKKSAP CIIFIDEIDA VGRQRGAGVG GGHDEREQTL NQMLVEMDGF EGNEGVIVIA
ATNRPDVLDS ALLRPGRFDR QVVVGLPDVR GREQILKVHM RKVPLSDDVK ASVIARGTPG
FSGADLANLV NEAALFAARG NRRVVSMEEF ERAKDKIMMG AERRSMVMSE AEKEMTAYHE
AGHAIVGCLV PEHDPVHKVT IIPRGRALGV TFFLPVADAI SQSRLKLESQ ISVAYGGRLA
EELIYGSDKV STGASQDIKY ATSIARNMVT QWGFSDKLGP LLYAEEDNEV FLGRSMGKSK
AMSDDTARII DAEIKAFIDK NYARAQSLLN DNMDILHSMK DALMKYETID SLQIDDLMNR
REVRLPAEWQ KDETSDDDGN TPKAGADEKA DVSPEKSDSD TEIEPKVDDA DGTPAK
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