Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0992 |
Symbol | |
ID | 4017589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1129560 |
End bp | 1130378 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954982 |
Product | peptidase M48, Ste24p |
Protein accession | YP_562003 |
Protein GI | 91792352 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000166595 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCA TTATCGCCAA TTCCCTATTA AGTCTATTCG CTGCAACTGT TCTCAGTGCC TGTGTGAGTA CTCAATCACC CACAGGTCGC AGTCAGACCC TGTTGTTTTC TGAAGCTCAA ATGCAAAAAA TGGGCGCCGA ATCTTTTGCC TCTATGAAGC AAGAGCAGAA AGTCAGTAAA GATAAAGCCT TAACCACTTA TGTTAATTGT GTCGCTAAGC GGATAACGGA TGTGTTGCCG GGCGAGGCTA AACCTTGGGA GCTAGTCTTG TTTGAATCTG ATCAAGTGAA TGCCTTCGCG GTCCCTGGTG GTTTTATCGG GGTTTACACG GGTTTATTGA ATGTAGCTAA CACTCAAGAT CAATTAGCCA CAGTCTTAGG CCATGAAGTC GCCCACGTGT TAGCTCATCA TGGTAATGAA CAAGTGTCCC GTGCACAGAT GACGGGGTTA GGCATACAGC TTGCGGATGT TGCCCTTGGC GCTGGCGGCG TATCTAATAA AGACTTATAT ATGCAAGCCC TAGGATTAGG GGCCAAGGTA GGTTACATCT TGCCCTTTGG TCGAACCCAA GAAAGTGAAG CGGATGTCAT GGGGCTTGAG TTGATGGCCA AGGCTGGATT TGATCCTAGC CAGAGCATCA CGCTTTGGCA GAACATGGCT AAAGCCGGTG GGGCTCAGGG GCCTGAATTG CTTTCGACTC ATCCGTCCAA TGAGCGCCGT ATTCAAGACT TGCAAGGATT ACAAGGGCGT GTGGCGCCGC TGTATCTCGC AGCCCGTGAA ACCCAATTGG CCAAATGCAT TCAGCCTGGT AAAAAATAG
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Protein sequence | MKPIIANSLL SLFAATVLSA CVSTQSPTGR SQTLLFSEAQ MQKMGAESFA SMKQEQKVSK DKALTTYVNC VAKRITDVLP GEAKPWELVL FESDQVNAFA VPGGFIGVYT GLLNVANTQD QLATVLGHEV AHVLAHHGNE QVSRAQMTGL GIQLADVALG AGGVSNKDLY MQALGLGAKV GYILPFGRTQ ESEADVMGLE LMAKAGFDPS QSITLWQNMA KAGGAQGPEL LSTHPSNERR IQDLQGLQGR VAPLYLAARE TQLAKCIQPG KK
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