| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0988 |
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| Symbol | |
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| ID | 4016758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1126820 |
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| End bp | 1127932 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954978 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_561999 |
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| Protein GI | 91792348 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000151305 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA AATTGCAGTC TTGCGGATGT TCTGGTGACA GAGTATTCAC AAGCTGCAAT
TTTTTTATTA AAGAGACGAT CCTTATTATG ATGACTCCCT CTCTAAAAAA TCTTAGTTTA
TTAGCCCTTA TTTGGCTGCT CAGCGCTTGT AGCCAGCCCA ATGAAGTGAT TGCCTTATCT
GGCAATACTA TGGGAACCAC ATACAACATT AAACTCAATG CTCATGAAGG CTTGCTGGAG
GCTAAGGCCT TGCAAGCTGA AATTGATTTG GCGTTGGAGC AAGTTAACGA TCAGATGTCC
ACCTATAGAA AGACGTCTGA GTTATCACAG TTCAACCAAT TATCTGTTGG TGAAACTGTG
CAAGTATCAA GTGACACCAT AAAGGTGATT GCAGAGGGCA AGCGTTTGCA TGAACTGACC
TCTGGCGCGC TGGATATCAC TTTAGGGCCT TTGGTCAATT TGTGGGGCTT TGGCCCAGAT
AAGAAACCTC TGACCGTACC TACGGTTGAA GAGATTGCCG CGGCAAAAGC TAAAACGGGT
ATGGATGGCT TTGCAATTCA AGCGACCGAG AGTCAAGGTG CGCTGCTCAA GCAAAAAGAC
GGCATATATG TCGATTTATC GGCGATAGCT AAAGGCTTTG GAGTCGATAA GATTGCCAGC
TTATTAGATC AACATCAGGT CAGTGGTTAT CTGGTGGAGA TAGGCGGCGA ACTTAGAGTT
AAGGGCAGCA AAAACGATAG CAGCCCATGG CGGATTGCCA TAGAGCAGCC AACAACGGAT
GGCCGAGAGA TCCAGCAAGT GATAGCTCCA GGTACCATGG GACTGGCAAC CTCTGGTGAT
TATCGCAATT ACTTTGAAGA TGAAGGCCAG CGCTTCTCTC ATCTTATCGA CCCTCGTACG
GGTATGCCGA TTAAGCACAC ATTAGCCTCT GTCACTGTGT TACATCCCGA ATGCATGACC
GCCGATGGCC TAGCCACTGC TATGATGGTA TTAGGGACAC AAGCATCATT GGCGCTTGCC
AAAGAGCAAA ATTTAGCAAT AATGCTGATT GAGAAGCAGC AACAAGGTTT TCAGGTCTTC
TACAGTGAAG CCTTTAAAGC GTATGTAAAC TAG
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| Protein sequence | MKTKLQSCGC SGDRVFTSCN FFIKETILIM MTPSLKNLSL LALIWLLSAC SQPNEVIALS
GNTMGTTYNI KLNAHEGLLE AKALQAEIDL ALEQVNDQMS TYRKTSELSQ FNQLSVGETV
QVSSDTIKVI AEGKRLHELT SGALDITLGP LVNLWGFGPD KKPLTVPTVE EIAAAKAKTG
MDGFAIQATE SQGALLKQKD GIYVDLSAIA KGFGVDKIAS LLDQHQVSGY LVEIGGELRV
KGSKNDSSPW RIAIEQPTTD GREIQQVIAP GTMGLATSGD YRNYFEDEGQ RFSHLIDPRT
GMPIKHTLAS VTVLHPECMT ADGLATAMMV LGTQASLALA KEQNLAIMLI EKQQQGFQVF
YSEAFKAYVN
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