Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0987 |
Symbol | |
ID | 4016757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1125569 |
End bp | 1126795 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637954977 |
Product | Na(+)-translocating NADH-quinone reductase subunit F |
Protein accession | YP_561998 |
Protein GI | 91792347 |
COG category | [C] Energy production and conversion |
COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00101326 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAG TCTATCTAGG TGTTGGTATG TTCACCGCCA TTGTCTTAGT CTTAGTCTTA GTGATTCTAT TCGCTAAATC TAAGCTAGTG GCAAGTGGTG ATATCATCAT TGGCATCAAT GGTGATGCAG ATAAAGCGAT TACAACAGGC GCGGGTGGCA AGCTACTTAG TGTGTTAGCT GACAACGGTA TTTTCGTGTC AAGTGCCTGT GGTGGCGGTG GCTCTTGTGG TCAGTGTCGC GTGAATATTA AGTCTGGTGG TGGTGATATT CTGCCAACCG AACTTGATCA CATCAGCAAG GGTGAAGCCC GCGGCGGTTG TCGTCTTTCA TGTCAGGTTA ACGTTAAATC TGATATGGAA ATTGAACTTG ATGAAGAGAT TTTCGGCATC AAGAAGTGGG AATGTGACGT TATTTCTAAC GATAACAAAG CCACCTTCAT TAAAGAACTT AAGCTACAGA TCCCAGATGG TGAATCTGTG CCGTTCCGCG CCGGTGGTTA TATTCAGATT GAAGCCCCTG CTCACCATGT GAAATATGCT GATTTCGACG TACCAGCAAA ATACCGTGGC GATTGGGAAC ATTTTGGTTT CTTTAAACTT GAGTCAAAAG TTGATGAAGA AACCATTCGT GCATACTCTA TGGCTAACTA CCCAGAAGAG TTTGGCATCA TAATGCTAAA CGTGCGTATT GCTACGCCGC CACCACGTAA CTTAAGCCTG CCTTGTGGCA AGATGTCTTC GTACATCTGG AGCTTAAAAG CGGGTGATAA AGTGACAATT TCTGGTCCAT TTGGTGAGTT TTTTGCCAAA GATACTGACG CAGAAATGGT ATTTATCGGT GGTGGTGCGG GTATGGCACC AATGCGTTCA CACCTTTTCG ATCAGCTCAA GCGTCTTAAG TCTAAGCGTA AGATGAGTTT CTGGTACGGC GCGCGCTCTA AGCGTGAGAT GTTCTATGTG GAAGATTTTG ACGGCCTAGC GGCTGAGAAC GAAAACTTCC AGTGGCACGT TGCTCTGTCA GATCCACAAG CCGAAGATGA ATGGACTGGT TACACAGGTT TCATTCATAA CGTATTGTAT GAAAACTACT TACGTGACCA CGATGCACCA GAAGATTGTG AATTCTACAT GTGTGGTCCA CCTATGATGA ATGCGGCTGT GATCAGCATG CTTAAAGATC TGGGTGTTGA AGATGAAAAC ATCTTATTGG ATGACTTTGG CGGTTAA
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Protein sequence | MLEVYLGVGM FTAIVLVLVL VILFAKSKLV ASGDIIIGIN GDADKAITTG AGGKLLSVLA DNGIFVSSAC GGGGSCGQCR VNIKSGGGDI LPTELDHISK GEARGGCRLS CQVNVKSDME IELDEEIFGI KKWECDVISN DNKATFIKEL KLQIPDGESV PFRAGGYIQI EAPAHHVKYA DFDVPAKYRG DWEHFGFFKL ESKVDEETIR AYSMANYPEE FGIIMLNVRI ATPPPRNLSL PCGKMSSYIW SLKAGDKVTI SGPFGEFFAK DTDAEMVFIG GGAGMAPMRS HLFDQLKRLK SKRKMSFWYG ARSKREMFYV EDFDGLAAEN ENFQWHVALS DPQAEDEWTG YTGFIHNVLY ENYLRDHDAP EDCEFYMCGP PMMNAAVISM LKDLGVEDEN ILLDDFGG
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