| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0986 |
|---|
| Symbol | |
|---|
| ID | 4016756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1124914 |
|---|
| End bp | 1125522 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637954976 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit E |
|---|
| Protein accession | YP_561997 |
|---|
| Protein GI | 91792346 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
|---|
| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00118082 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATT ATATTAGTTT ATTAATTCGC TCTGTCTTCA TTGAAAACAT GGCGTTATCC
TTCTTCTTAG GTATGTGTAC TTTCTTAGCT GTGTCTAAGA AAGTCACCAC TGCGATGGGA
TTAGGTGTGG CGGTTATCGT GGTACTTGCG ATTTCTGTAC CTGCTAACCA AATCATCTAC
CAAGGTATTT TAGCGCCGGG CGCATTAGCT TGGGCTGGTG TTCCTGATGC AGATTTGAGC
TTCTTGAAGT TCATTACCTT CATCGGTGTT ATCGCGGCTT TGGTGCAAAT TCTGGAAATG
ACCTTAGATA AGTATTTCCC GCCTTTGTAC AACGCCTTAG GTATCTTCTT ACCACTTATC
ACAGTGAACT GTGCCATCTT CGGTGCGGTT GCTTTCATGG TTGAGCGTGA TTACAACCTA
ACAGAAAGTT TAGTGTTTGG TGTAGGTTCT GGTATCGGTT GGGCACTGGC CATAGTTCTA
CTGGCCGCTG TTCGCGAAAA GATGAAGTAT TCTGATGTGC CAAATGGGCT ACGTGGTTTA
GGTATTACCT TTATCTCTGC AGGCCTAATG GCATTAGGTT TCATGTCGTT CTCAGGTGTG
TCTCTTTAA
|
|---|
| Protein sequence | MEHYISLLIR SVFIENMALS FFLGMCTFLA VSKKVTTAMG LGVAVIVVLA ISVPANQIIY
QGILAPGALA WAGVPDADLS FLKFITFIGV IAALVQILEM TLDKYFPPLY NALGIFLPLI
TVNCAIFGAV AFMVERDYNL TESLVFGVGS GIGWALAIVL LAAVREKMKY SDVPNGLRGL
GITFISAGLM ALGFMSFSGV SL
|
|---|
| |