| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0983 |
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| Symbol | |
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| ID | 4016753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1122287 |
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| End bp | 1123486 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954973 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_561994 |
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| Protein GI | 91792343 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000264677 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTTGA AAGATTTTTT CAAACGTATT GAACCCCAGT TTGAAAAGGG TGGTAAATAC
GAGAAGTGGT ATGCGCTTTT TGAAGCGGTT TACACGGGTT TTTATACGCC GGGTAAAGTG
AACAAAGGCA CAACCCATGT ACGCGATAAT TTAGACTTGA AGCGTATGAT GATTACCGTT
TGGGCTTGCG CCTTACCTGC CATGTTTTTT GGTATGTATA ACGTAGGTTT CCAAGCGCAA
GAAGCATTAG CCGCTGGCTT TGCGGTTCCT GATGTGTGGC AAACCAGCCT ATTTGGCCTA
TTTGGTACGC AGCTGACAGC AAGCTCTGGC ATCCCAGCCT TACTTTGGTA TGGCATGTGT
TTCTTCCTAC CTATTTATGC AGTGACATTT GTTGTCGGTG GTATTTGGGA AGTGCTATTT
GCGGCCGTTC GTGGTCATGA AGTTAACGAA GGTTTCTTCG TGACCTCTAT CCTGTTCGCT
TTGACTTTAC CTGCAACGAT TCCGTTATGG ATGGTGGCTT TAGGTATTAC CTTCGGTGTG
GTTATCGCCA AGGAAGTCTT CGGTGGCACG GGTCGTAACT TCTTAAACCC AGCATTAGCA
GGCCGTGCTT TCTTGTTCTT CGCTTACCCG CTAAACATGT CTGGCGACAC CTCTTGGGTG
GTTGCAGACG GTTTCTCCGG CGCGACGCAC TTAAGCCAAG CTGCCCAAGG CACGTTAGAT
TATTCGCTTA ATCAAGACTG GTGGAATGCT TTCCTAGGTT TCATTCCTGG TTCTGTGGGT
GAAGTATCGA CCTTAGCAAT TTTGCTCGGT GGTTTAGTGA TTATCTACAC GCGTATCGCC
TCGTGGCGCA TCGTGGGTGG GGTATTGCTA GGTATGATGG CGGTTGCTTT CCTATTAAAT
GCTATCGGTA GCGACACTAA CCCTATGTTT GCCATGCCCT GGTACTGGCA CTTTGTCTTA
GGTGGTTTTG CTTTTGGTAT GATGTTTATG GCGACAGATC CTGTGTCTGC CTCATTTACC
AACAAAGCAA AATGGGGCTA CGGTTTCTTA ATCGGCGCTA TGGCGGTGTT TATCCGTGTG
GTTAACCCTG CATTCCCTGA AGGCATGATG CTGGCAATTT TGTTTGCTAA CTTATTTGCG
CCACTGTTCG ACCATTTTGT GGTCCAGGCA AATATCAAGC GGAGGATCGC TCGTGGCTAG
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| Protein sequence | MGLKDFFKRI EPQFEKGGKY EKWYALFEAV YTGFYTPGKV NKGTTHVRDN LDLKRMMITV
WACALPAMFF GMYNVGFQAQ EALAAGFAVP DVWQTSLFGL FGTQLTASSG IPALLWYGMC
FFLPIYAVTF VVGGIWEVLF AAVRGHEVNE GFFVTSILFA LTLPATIPLW MVALGITFGV
VIAKEVFGGT GRNFLNPALA GRAFLFFAYP LNMSGDTSWV VADGFSGATH LSQAAQGTLD
YSLNQDWWNA FLGFIPGSVG EVSTLAILLG GLVIIYTRIA SWRIVGGVLL GMMAVAFLLN
AIGSDTNPMF AMPWYWHFVL GGFAFGMMFM ATDPVSASFT NKAKWGYGFL IGAMAVFIRV
VNPAFPEGMM LAILFANLFA PLFDHFVVQA NIKRRIARG
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