| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0982 |
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| Symbol | |
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| ID | 4016752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1120953 |
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| End bp | 1122287 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954972 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit A |
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| Protein accession | YP_561993 |
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| Protein GI | 91792342 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
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| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00150334 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACAA TTAAGAAAGG ATTGGAACTG CCTATAACAG GCGGACCAGA GCAAGTTATC
CATAATGGCC CAGCCATTAA CCATGTAGCT ACTTTGGGTG AAGAGTATAT TGGCTTACGT
CCAACGATGA AAATCAAAGT GGGCGACAAA GTACAAAAAG GTCAGGTTCT TTTTGAAGAT
AAGAAGAATT TAGGCGTTAA ATATACGGCT TTAGCCAGTG GTACTATATT AGAAATTAAT
CGAGGCGCAA AACGCGTACT TCAGTCAGTG GTGATTGCCG TTGAGGGTGA CGATAGTGTC
GCGTTCTCAA AGCATGATGC TGGCTCGTTG GCGACGTTAG ATGCTCAGCT AGTTCGTACT
AATCTGATTG ATTCAGGTTT ATGGACCGCT TTGCGTACCC GCCCATTCAG TAAAGTCCCA
GCCGTCGATG CGACAGCTGC CGGTATTTTC GTTACTGCCA TCGATACTCA ACCGTTAGCG
GCAGATCCTG CTGTGGTTAT CGCCGAGCAT AAAGACGACT TTGCCAATGG CTTAACCTTA
CTCGCCAAAC TAACAGAAGG TAAAGTTTTC CTCTGTAAAG CACCGGGTGC GGATATTCCA
GCAGCCAATG CTCAAGTTGA AGAGTTTGCC GGCATTCATC CAGCAGGTTT AGTGGGAACG
CACATCCATA ATCTTTTACC CGCCTCTGCC AAGCGCAGTG TGTGGCACAT AGGTTATCAA
GACGTGATCG CCATTGGCCA GTTATTCACT CAAGGTGTGT TAAACACTGA GCGTGTATTT
GCTATTGGTG GCCCTAAAGC TAAAAAGCCT CGTCTAGTGC GCAGCCGTTT AGGTGCAAGC
TTGGTTGAGC TTATGGCTGA TGAGACTCAA GCCGGTGACG TGCGTGTGAT TTCAGGTTCT
GTGCTCAATG GTCGTACTGC AGCAGGCGTT CACGCTTATG CAGGACGTTA TCACCAGCAG
ATCACTGTGC TAGAAGAAGG TCGTGAGCAA GAGTTTTTCG GCTGGGCTAT GCCTGGTGGA
GATAAGTTCT CTATTACTCG TTCATTCCTA AGCCATTTAA GTCCTTCTCG TTTATTCAAT
ATGACGACAA GCACGGGTGG TTCAGAGCGC GCCATGGTAC CCATTGGTAA CTATGAACGT
GTTGTGCCAC TGGATGTGTT ACCGACATTG TTACTAAGAG ATCTGCTTTC TGGTGATTTT
GACAGCGCAG TGACCCTTGG CGCATTAGAA CTCGACGAAG AAGATTTGGC ATTATGTACT
TTCGTGTGTC CTGGTAAGTA TGACTATGGT TCATATTTAC GCGACTGTTT AGATACGATC
GAGAGGGAAG GCTAA
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| Protein sequence | MITIKKGLEL PITGGPEQVI HNGPAINHVA TLGEEYIGLR PTMKIKVGDK VQKGQVLFED
KKNLGVKYTA LASGTILEIN RGAKRVLQSV VIAVEGDDSV AFSKHDAGSL ATLDAQLVRT
NLIDSGLWTA LRTRPFSKVP AVDATAAGIF VTAIDTQPLA ADPAVVIAEH KDDFANGLTL
LAKLTEGKVF LCKAPGADIP AANAQVEEFA GIHPAGLVGT HIHNLLPASA KRSVWHIGYQ
DVIAIGQLFT QGVLNTERVF AIGGPKAKKP RLVRSRLGAS LVELMADETQ AGDVRVISGS
VLNGRTAAGV HAYAGRYHQQ ITVLEEGREQ EFFGWAMPGG DKFSITRSFL SHLSPSRLFN
MTTSTGGSER AMVPIGNYER VVPLDVLPTL LLRDLLSGDF DSAVTLGALE LDEEDLALCT
FVCPGKYDYG SYLRDCLDTI EREG
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