Gene Sden_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0971 
Symbol 
ID4016741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1112091 
End bp1112888 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content48% 
IMG OID637954961 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_561982 
Protein GI91792331 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAT TCATCACAAT ACTCGCCCTG AGCTTGGGTT TATCTGCCTG CAGTCTAATC 
CCAAAGCCTG ATTTGAATCT AAGCGAAGCC GAAGTCAACC CTATGAGCGA AACCATGCGC
TCATTGCAAG CAAAACCTGG TCCCAAGTAT GCCATTCCTG TGGCTGTGTA TTCGTTTCGC
GATCAGACCG GGCAATATAA GCCCCAGGCC AATGTCAGCT CTTTCTCTAC TGCAGTGACC
CAAGGCGCAA CATCCATGTT AGTGCAGACG CTACTGGACT CTAAATGGTT TACTCCGGTT
GAACGTGAGG GCTTGCAGAA CCTGCTTACA GAAAGAAAAA TAAGCGCTAA ACAAGGCAGC
AAAGAAGATA TGCCAGGGCT TTCGGATGCG AGATTGCTAC TGGAAGGCGG CATCATCAGT
TATGAGACTA ATACCAGCAC GGGCGGCGCT GGCGTTGAGT ATTATGGCAT TGGCGCCTCT
GAAATGTACC GTGAAGACCA AGTGACGATT TATCTGCGCG CTGTGGATGT TCATACGGGT
AAAGTGATGA TGTCAGTGTC TACCACTAAG CGTGTCTTGT CTCAAGAAAT GCGTGCTGGA
TTATTCAGGT ACACTAGCCT TAATCGCCTC GCTGAAGCGG AATTTGGCTT CACCACCAAT
GAGCCTGTGC AATTTTGTGT GCTACAAGCC ATCGAGCTAG CAGTGTCTGA AATGATAGAC
AAGGGCATTA GCCAAGGTTT TTGGAAGCCG ATTAATGGTA CCAATAACGG TCAAGGTGCG
CTCTTGGATG CCTCTTAG
 
Protein sequence
MKSFITILAL SLGLSACSLI PKPDLNLSEA EVNPMSETMR SLQAKPGPKY AIPVAVYSFR 
DQTGQYKPQA NVSSFSTAVT QGATSMLVQT LLDSKWFTPV EREGLQNLLT ERKISAKQGS
KEDMPGLSDA RLLLEGGIIS YETNTSTGGA GVEYYGIGAS EMYREDQVTI YLRAVDVHTG
KVMMSVSTTK RVLSQEMRAG LFRYTSLNRL AEAEFGFTTN EPVQFCVLQA IELAVSEMID
KGISQGFWKP INGTNNGQGA LLDAS