| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0954 |
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| Symbol | |
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| ID | 4016556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1093018 |
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| End bp | 1094373 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954944 |
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| Product | peptidase S41 |
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| Protein accession | YP_561965 |
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| Protein GI | 91792314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000432114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGAA GATACCTATC ACAAGTGCTG TCTACAGCAC TCGTTATTGT GATGAGCACA
AGTGTGTTGG CGGGGGAAGA TAACAAGCTG ACCCATGAAG ATAAAATCTA CGGATTATCA
CTTTTTTGGA AAGAAGCCAG TGATAACTTC GCCTATTTTG ATCAAGTCCC CGAATTGGAC
TTTGACGCTG CTTATCAAGG CTTTATCCCT CGAGTATTGG CGACACAATC AGACTATGAG
TATTATCGAG AATTAATGCG CTTTAATGCC TTACTCAAAG ATGGCCATAC CAATGTTTAT
TTACCGCAAG GCTTGGAGCA AGGACACATT GACTGGCCGA GCATTGGGCT TTATGAAGCG
AATAAAGAAG CGGTTGTTAT CTCTACTAGC TTAGCGTTGC AGCACAGTAT TCCCTTAGGT
TCGACCTTAG TGAAACTGGA TGATGTCGAG CTCGCCACTT ATCTTGAAGC GTCCGTCATG
CCCTATATTG CCAGCTCAAC CGAGCACATA CTGTGGCACA GCGCCGTGCG GGATGCACTC
GATGGCAAAC CTGGCTCTCA CGTTAAACTC ACCCTTAAAA CACCACAAGG TGAAATAAAG
CAGCTGACGC TAACACGAGA TAATAATTTG AGAAAGCGCG CTAATCCTGA GGAGAGTGAG
CGAATTTCCC TTAAGCGTGC TCAGTCTAAT GGCGAATTAT TCGAGTTTAA ATGGCTAGAG
CCTGGCATGG GCTATTTAGC CTTAAATGGA TTTCATGACA AGCAAATTTT AACGGATTTC
TACGCCGCCT TAGACGATAT TCGCAAAGCT AAACGCTTAA TTATCGATTT GCGTTTCAAT
GGCGGGGGAG ACTCGCTCAT TGCCGCAGAA ATATTATCTC ATTTTAGCGA AACTGAATTG
AAAGGTGCGA TTTGGAAGAC TCGCAAGCAC ATTGCAGCTT TCAAGGCTTG GGGGAAATAT
GATGCTAACT ATAAAGTCTA TGCTGATGAT AATGCTTGGG AAAGTGGCGA GATGGAAATC
TTCCCTTCTA AAGAAAACCC CATTATAGTG CCCACTTATG TGCTCACCAG CAGGGACACG
GCGTCAGCGG CTGAAGACTT CCTTATCTAT GCCGATCCTT TAGCCCATTT CACTGTGCTT
GGGGAAAAAA CCTATGGCAG CACAGGTCAG CCCATCTTCT TCGATTTGCC CGGTGGAGGA
TCATTTAGAA TATGCACTAA ACGAGATACT TATCCCGATG GCCGTGAGTT TGTGGGCTAT
GGCATCACTC CTGACGTGTT AATGACAATC ACTGCTGAGC GCTTAATTGC CGAGCAAGAC
TTTATGCTTG AGGAAGCCAT CAATAGGCTT AAATGA
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| Protein sequence | MSRRYLSQVL STALVIVMST SVLAGEDNKL THEDKIYGLS LFWKEASDNF AYFDQVPELD
FDAAYQGFIP RVLATQSDYE YYRELMRFNA LLKDGHTNVY LPQGLEQGHI DWPSIGLYEA
NKEAVVISTS LALQHSIPLG STLVKLDDVE LATYLEASVM PYIASSTEHI LWHSAVRDAL
DGKPGSHVKL TLKTPQGEIK QLTLTRDNNL RKRANPEESE RISLKRAQSN GELFEFKWLE
PGMGYLALNG FHDKQILTDF YAALDDIRKA KRLIIDLRFN GGGDSLIAAE ILSHFSETEL
KGAIWKTRKH IAAFKAWGKY DANYKVYADD NAWESGEMEI FPSKENPIIV PTYVLTSRDT
ASAAEDFLIY ADPLAHFTVL GEKTYGSTGQ PIFFDLPGGG SFRICTKRDT YPDGREFVGY
GITPDVLMTI TAERLIAEQD FMLEEAINRL K
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