| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0948 |
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| Symbol | |
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| ID | 4016893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1084526 |
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| End bp | 1086385 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637954938 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_561959 |
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| Protein GI | 91792308 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.497988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATGA CAATGACAAT GACCAACACA GCCTCGCGCT CACTAGGGCA AAAATACCGC
CGCAGTTTGC TAAAGCCATT CGTTAGCCTA GTCGTTGGCG CAGCGGCGCC TCTCGCGTTA
TTACTCAGCC CAGCCCTGAT GGCGCACACT TCCCTAGTGA GTAATATCCA AGGTTACAGC
ATGGCGGCTG GCAAATTGAG TCGCTTTAAC GCCATCTTGT TCACCGATGA TAAAATTGAT
GCCCTTTACG GCCATGACTT CCCTGCGGCG CCTGAGTCTT TCGAGCACTT ATTAAATGAG
AAACACCATG TCGATGACCT AAGCCATAGC AGCCGCATCG ATAACAATAA AGTTAACCAT
ATCGACGGCC AAGGCCTGAC CTTATTGCCC GGGCTTATCG ATGCCCACGG CCACGTATTG
GGTTATGGCT TAAGCTTGTT GCAAGCCCAG CTCAGAGACA GCCAAAGCGA GCAAGATGCG
GTCGCTAAAG TACAAACCTT CAGAAAAGCC CACCCGCAAT TGACTTGGGT TCAAGGCCGA
GGCTGGAACC AAGTGCTGTG GCCGAGTAAA GCCTTCCCTA GCAAAGATTT GTTAGACAAG
GCTTTTCCCG ACACCCCTGT GTGGCTAATA CGCATCGACG GCCATGCTGG CTGGGCCAAT
AGCGCCGCCA TGAAACTGGC TAACATCAGC GTAGACACCC AAGCACCAGA AGGCGGCGAA
ATCATTCGCG ACAGTCAAGG CCAAGCCACT GGGGTATTTA TCGACAATGC CATGGGACTC
ATAGCAGCTA ACATTCCCCC ACTCACCTTG GATGAGCAAA AAGCCGTGTT ACTGAGTTCC
TTACAACAAC TGGCAACACT TGGTCTCACC AGTGTGCATG ACGCTGGCAT TGGCAGCACC
ACAATCAAAG CCTATAAAGA GTTAGATCAA GCGAAGCACT TGCCTATTCG TGTCTATGCC
ATGATAGATG CCACCGATGA GCACTTCAGC GACCTCATTA AAGCGGGGCC CACCCTGAGC
GACTTAGGCC ACAGCGATAT GCTAGCCATC AACAGCGTTA AAATCTCCGC CGATGGTGCC
CTAGGCAGCA GAGGCGCGGC GCTCATCAGC GACTACAGTG ACAAAGCAGG CCATAAAGGC
TTGTTGTTGT ATCCTGAAGC CAAACTCACT CAGACCATGG AAGCCGCCAT GGCGGCAGGA
TTTCAAGTCA ATACCCATGC CATTGGTGAT GAGGCCAATA AACAGGTCTT GGATAACTAT
CAAGCCTTGA TCGCCAAAAC CAAGACTAAA GCCTTAAGGC ACAGAGTTGA ACATGCTCAA
GTGCTGCAAC TGGCCGACAT TCCTCGCTTT TCAGCCCTTG GGGTTATTGC CTCCATGCAG
GCAACCCATG CCACCAGCGA TAAAAACATG GCAGAAGACA GATTAGGGCC TGATAGAATC
AAGGGTGCCT ATGCTTGGCA GAAACTGATT AAAAGCGGCG CAATAATCGC AGCAGGATCA
GATTTCCCCA TAGAATCCCC CAACCCTTTC TTTGGCCTGC ATGCATCGGT AACACGTCAA
GATCAACAAA ATCAGCCTCT TGGTGGCTGG CACAGCATTG AGCGCATGAG CCTTGCTCAG
GCCTTTGAAA CCTTCAGCTA TAATGCCGCC TTTGCCGCCC ATCAAGAACA GATCATCGGC
TCATTAGCCC CGGGGATGAA AGCCGATTTT ATTTTAATCG ATAAAAACAT CTTTACCTTA
GCCCCAGAAC TTATCTGGCA AACCCAAGTC CAACAGACGT GGGTCAATGG CAGGCGCCTA
TATCAGACCC ACGCAGACCT AAAAATGTCA GAGACTCAAC ACACTCATCC AGCCAATTAA
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| Protein sequence | MTMTMTMTNT ASRSLGQKYR RSLLKPFVSL VVGAAAPLAL LLSPALMAHT SLVSNIQGYS
MAAGKLSRFN AILFTDDKID ALYGHDFPAA PESFEHLLNE KHHVDDLSHS SRIDNNKVNH
IDGQGLTLLP GLIDAHGHVL GYGLSLLQAQ LRDSQSEQDA VAKVQTFRKA HPQLTWVQGR
GWNQVLWPSK AFPSKDLLDK AFPDTPVWLI RIDGHAGWAN SAAMKLANIS VDTQAPEGGE
IIRDSQGQAT GVFIDNAMGL IAANIPPLTL DEQKAVLLSS LQQLATLGLT SVHDAGIGST
TIKAYKELDQ AKHLPIRVYA MIDATDEHFS DLIKAGPTLS DLGHSDMLAI NSVKISADGA
LGSRGAALIS DYSDKAGHKG LLLYPEAKLT QTMEAAMAAG FQVNTHAIGD EANKQVLDNY
QALIAKTKTK ALRHRVEHAQ VLQLADIPRF SALGVIASMQ ATHATSDKNM AEDRLGPDRI
KGAYAWQKLI KSGAIIAAGS DFPIESPNPF FGLHASVTRQ DQQNQPLGGW HSIERMSLAQ
AFETFSYNAA FAAHQEQIIG SLAPGMKADF ILIDKNIFTL APELIWQTQV QQTWVNGRRL
YQTHADLKMS ETQHTHPAN
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